The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies

Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infectio...

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Published in:Malaria Journal
Main Authors: Mirco Sandfort, Wuelton Monteiro, Marcus Lacerda, Wang Nguitragool, Jetsumon Sattabongkot, Andreea Waltmann, Henrik Salje, Amélie Vantaux, Benoit Witkowski, Leanne J. Robinson, Ivo Mueller, Michael White
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2023
Subjects:
Online Access:https://doi.org/10.1186/s12936-023-04515-4
https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f
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spelling ftdoajarticles:oai:doaj.org/article:37ed62f059d546afb978f4df0af9ed4f 2023-05-15T15:18:42+02:00 The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies Mirco Sandfort Wuelton Monteiro Marcus Lacerda Wang Nguitragool Jetsumon Sattabongkot Andreea Waltmann Henrik Salje Amélie Vantaux Benoit Witkowski Leanne J. Robinson Ivo Mueller Michael White 2023-03-01T00:00:00Z https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f EN eng BMC https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-023-04515-4 1475-2875 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f Malaria Journal, Vol 22, Iss 1, Pp 1-12 (2023) Malaria Plasmodium vivax Plasmodium falciparum Spatial epidemiology Spatial clustering Spatiotemporal clustering Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2023 ftdoajarticles https://doi.org/10.1186/s12936-023-04515-4 2023-03-26T01:33:52Z Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. Methods Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. Results Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. Conclusions The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The ... Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Pacific Malaria Journal 22 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Malaria
Plasmodium vivax
Plasmodium falciparum
Spatial epidemiology
Spatial clustering
Spatiotemporal clustering
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
spellingShingle Malaria
Plasmodium vivax
Plasmodium falciparum
Spatial epidemiology
Spatial clustering
Spatiotemporal clustering
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
Mirco Sandfort
Wuelton Monteiro
Marcus Lacerda
Wang Nguitragool
Jetsumon Sattabongkot
Andreea Waltmann
Henrik Salje
Amélie Vantaux
Benoit Witkowski
Leanne J. Robinson
Ivo Mueller
Michael White
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
topic_facet Malaria
Plasmodium vivax
Plasmodium falciparum
Spatial epidemiology
Spatial clustering
Spatiotemporal clustering
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
description Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. Methods Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. Results Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. Conclusions The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The ...
format Article in Journal/Newspaper
author Mirco Sandfort
Wuelton Monteiro
Marcus Lacerda
Wang Nguitragool
Jetsumon Sattabongkot
Andreea Waltmann
Henrik Salje
Amélie Vantaux
Benoit Witkowski
Leanne J. Robinson
Ivo Mueller
Michael White
author_facet Mirco Sandfort
Wuelton Monteiro
Marcus Lacerda
Wang Nguitragool
Jetsumon Sattabongkot
Andreea Waltmann
Henrik Salje
Amélie Vantaux
Benoit Witkowski
Leanne J. Robinson
Ivo Mueller
Michael White
author_sort Mirco Sandfort
title The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
title_short The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
title_full The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
title_fullStr The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
title_full_unstemmed The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
title_sort spatial signature of plasmodium vivax and plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
publisher BMC
publishDate 2023
url https://doi.org/10.1186/s12936-023-04515-4
https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f
geographic Arctic
Pacific
geographic_facet Arctic
Pacific
genre Arctic
genre_facet Arctic
op_source Malaria Journal, Vol 22, Iss 1, Pp 1-12 (2023)
op_relation https://doi.org/10.1186/s12936-023-04515-4
https://doaj.org/toc/1475-2875
doi:10.1186/s12936-023-04515-4
1475-2875
https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f
op_doi https://doi.org/10.1186/s12936-023-04515-4
container_title Malaria Journal
container_volume 22
container_issue 1
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