The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infectio...
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ftdoajarticles:oai:doaj.org/article:37ed62f059d546afb978f4df0af9ed4f 2023-05-15T15:18:42+02:00 The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies Mirco Sandfort Wuelton Monteiro Marcus Lacerda Wang Nguitragool Jetsumon Sattabongkot Andreea Waltmann Henrik Salje Amélie Vantaux Benoit Witkowski Leanne J. Robinson Ivo Mueller Michael White 2023-03-01T00:00:00Z https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f EN eng BMC https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-023-04515-4 1475-2875 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f Malaria Journal, Vol 22, Iss 1, Pp 1-12 (2023) Malaria Plasmodium vivax Plasmodium falciparum Spatial epidemiology Spatial clustering Spatiotemporal clustering Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2023 ftdoajarticles https://doi.org/10.1186/s12936-023-04515-4 2023-03-26T01:33:52Z Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. Methods Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. Results Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. Conclusions The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The ... Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Pacific Malaria Journal 22 1 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Malaria Plasmodium vivax Plasmodium falciparum Spatial epidemiology Spatial clustering Spatiotemporal clustering Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
spellingShingle |
Malaria Plasmodium vivax Plasmodium falciparum Spatial epidemiology Spatial clustering Spatiotemporal clustering Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 Mirco Sandfort Wuelton Monteiro Marcus Lacerda Wang Nguitragool Jetsumon Sattabongkot Andreea Waltmann Henrik Salje Amélie Vantaux Benoit Witkowski Leanne J. Robinson Ivo Mueller Michael White The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
topic_facet |
Malaria Plasmodium vivax Plasmodium falciparum Spatial epidemiology Spatial clustering Spatiotemporal clustering Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
description |
Abstract Background Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. Methods Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. Results Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. Conclusions The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The ... |
format |
Article in Journal/Newspaper |
author |
Mirco Sandfort Wuelton Monteiro Marcus Lacerda Wang Nguitragool Jetsumon Sattabongkot Andreea Waltmann Henrik Salje Amélie Vantaux Benoit Witkowski Leanne J. Robinson Ivo Mueller Michael White |
author_facet |
Mirco Sandfort Wuelton Monteiro Marcus Lacerda Wang Nguitragool Jetsumon Sattabongkot Andreea Waltmann Henrik Salje Amélie Vantaux Benoit Witkowski Leanne J. Robinson Ivo Mueller Michael White |
author_sort |
Mirco Sandfort |
title |
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_short |
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_full |
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_fullStr |
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_full_unstemmed |
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_sort |
spatial signature of plasmodium vivax and plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
publisher |
BMC |
publishDate |
2023 |
url |
https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f |
geographic |
Arctic Pacific |
geographic_facet |
Arctic Pacific |
genre |
Arctic |
genre_facet |
Arctic |
op_source |
Malaria Journal, Vol 22, Iss 1, Pp 1-12 (2023) |
op_relation |
https://doi.org/10.1186/s12936-023-04515-4 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-023-04515-4 1475-2875 https://doaj.org/article/37ed62f059d546afb978f4df0af9ed4f |
op_doi |
https://doi.org/10.1186/s12936-023-04515-4 |
container_title |
Malaria Journal |
container_volume |
22 |
container_issue |
1 |
_version_ |
1766348893486841856 |