Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.

Originally a binary classifier, Lot Quality Assurance Sampling (LQAS) has proven to be a useful tool for classification of the prevalence of Schistosoma mansoni into multiple categories (≤10%, >10 and <50%, ≥50%), and semi-curtailed sampling has been shown to effectively reduce the number of o...

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Published in:PLoS Neglected Tropical Diseases
Main Authors: Casey Olives, Joseph J Valadez, Simon J Brooker, Marcello Pagano
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2012
Subjects:
Online Access:https://doi.org/10.1371/journal.pntd.0001806
https://doaj.org/article/33efe62bde8f469083ab72ee2f98edd7
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spelling ftdoajarticles:oai:doaj.org/article:33efe62bde8f469083ab72ee2f98edd7 2023-05-15T15:15:31+02:00 Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control. Casey Olives Joseph J Valadez Simon J Brooker Marcello Pagano 2012-01-01T00:00:00Z https://doi.org/10.1371/journal.pntd.0001806 https://doaj.org/article/33efe62bde8f469083ab72ee2f98edd7 EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC3435238?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0001806 https://doaj.org/article/33efe62bde8f469083ab72ee2f98edd7 PLoS Neglected Tropical Diseases, Vol 6, Iss 9, p e1806 (2012) Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 article 2012 ftdoajarticles https://doi.org/10.1371/journal.pntd.0001806 2022-12-31T08:54:37Z Originally a binary classifier, Lot Quality Assurance Sampling (LQAS) has proven to be a useful tool for classification of the prevalence of Schistosoma mansoni into multiple categories (≤10%, >10 and <50%, ≥50%), and semi-curtailed sampling has been shown to effectively reduce the number of observations needed to reach a decision. To date the statistical underpinnings for Multiple Category-LQAS (MC-LQAS) have not received full treatment. We explore the analytical properties of MC-LQAS, and validate its use for the classification of S. mansoni prevalence in multiple settings in East Africa.We outline MC-LQAS design principles and formulae for operating characteristic curves. In addition, we derive the average sample number for MC-LQAS when utilizing semi-curtailed sampling and introduce curtailed sampling in this setting. We also assess the performance of MC-LQAS designs with maximum sample sizes of n=15 and n=25 via a weighted kappa-statistic using S. mansoni data collected in 388 schools from four studies in East Africa.Overall performance of MC-LQAS classification was high (kappa-statistic of 0.87). In three of the studies, the kappa-statistic for a design with n=15 was greater than 0.75. In the fourth study, where these designs performed poorly (kappa-statistic less than 0.50), the majority of observations fell in regions where potential error is known to be high. Employment of semi-curtailed and curtailed sampling further reduced the sample size by as many as 0.5 and 3.5 observations per school, respectively, without increasing classification error.This work provides the needed analytics to understand the properties of MC-LQAS for assessing the prevalance of S. mansoni and shows that in most settings a sample size of 15 children provides a reliable classification of schools. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic PLoS Neglected Tropical Diseases 6 9 e1806
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
Casey Olives
Joseph J Valadez
Simon J Brooker
Marcello Pagano
Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
topic_facet Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
description Originally a binary classifier, Lot Quality Assurance Sampling (LQAS) has proven to be a useful tool for classification of the prevalence of Schistosoma mansoni into multiple categories (≤10%, >10 and <50%, ≥50%), and semi-curtailed sampling has been shown to effectively reduce the number of observations needed to reach a decision. To date the statistical underpinnings for Multiple Category-LQAS (MC-LQAS) have not received full treatment. We explore the analytical properties of MC-LQAS, and validate its use for the classification of S. mansoni prevalence in multiple settings in East Africa.We outline MC-LQAS design principles and formulae for operating characteristic curves. In addition, we derive the average sample number for MC-LQAS when utilizing semi-curtailed sampling and introduce curtailed sampling in this setting. We also assess the performance of MC-LQAS designs with maximum sample sizes of n=15 and n=25 via a weighted kappa-statistic using S. mansoni data collected in 388 schools from four studies in East Africa.Overall performance of MC-LQAS classification was high (kappa-statistic of 0.87). In three of the studies, the kappa-statistic for a design with n=15 was greater than 0.75. In the fourth study, where these designs performed poorly (kappa-statistic less than 0.50), the majority of observations fell in regions where potential error is known to be high. Employment of semi-curtailed and curtailed sampling further reduced the sample size by as many as 0.5 and 3.5 observations per school, respectively, without increasing classification error.This work provides the needed analytics to understand the properties of MC-LQAS for assessing the prevalance of S. mansoni and shows that in most settings a sample size of 15 children provides a reliable classification of schools.
format Article in Journal/Newspaper
author Casey Olives
Joseph J Valadez
Simon J Brooker
Marcello Pagano
author_facet Casey Olives
Joseph J Valadez
Simon J Brooker
Marcello Pagano
author_sort Casey Olives
title Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
title_short Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
title_full Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
title_fullStr Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
title_full_unstemmed Multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
title_sort multiple category-lot quality assurance sampling: a new classification system with application to schistosomiasis control.
publisher Public Library of Science (PLoS)
publishDate 2012
url https://doi.org/10.1371/journal.pntd.0001806
https://doaj.org/article/33efe62bde8f469083ab72ee2f98edd7
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source PLoS Neglected Tropical Diseases, Vol 6, Iss 9, p e1806 (2012)
op_relation http://europepmc.org/articles/PMC3435238?pdf=render
https://doaj.org/toc/1935-2727
https://doaj.org/toc/1935-2735
1935-2727
1935-2735
doi:10.1371/journal.pntd.0001806
https://doaj.org/article/33efe62bde8f469083ab72ee2f98edd7
op_doi https://doi.org/10.1371/journal.pntd.0001806
container_title PLoS Neglected Tropical Diseases
container_volume 6
container_issue 9
container_start_page e1806
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