Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic

Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asia...

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Published in:Cell Reports
Main Authors: Vincent J. Lynch, Oscar C. Bedoya-Reina, Aakrosh Ratan, Michael Sulak, Daniela I. Drautz-Moses, George H. Perry, Webb Miller, Stephan C. Schuster
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier 2015
Subjects:
Online Access:https://doi.org/10.1016/j.celrep.2015.06.027
https://doaj.org/article/308877f45d9448138e4c521937ee48f1
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spelling ftdoajarticles:oai:doaj.org/article:308877f45d9448138e4c521937ee48f1 2023-05-15T15:03:58+02:00 Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic Vincent J. Lynch Oscar C. Bedoya-Reina Aakrosh Ratan Michael Sulak Daniela I. Drautz-Moses George H. Perry Webb Miller Stephan C. Schuster 2015-07-01T00:00:00Z https://doi.org/10.1016/j.celrep.2015.06.027 https://doaj.org/article/308877f45d9448138e4c521937ee48f1 EN eng Elsevier http://www.sciencedirect.com/science/article/pii/S2211124715006397 https://doaj.org/toc/2211-1247 2211-1247 doi:10.1016/j.celrep.2015.06.027 https://doaj.org/article/308877f45d9448138e4c521937ee48f1 Cell Reports, Vol 12, Iss 2, Pp 217-228 (2015) Biology (General) QH301-705.5 article 2015 ftdoajarticles https://doi.org/10.1016/j.celrep.2015.06.027 2022-12-31T11:49:32Z Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asian elephants and two woolly mammoths, and we identified and functionally annotated genetic changes unique to woolly mammoths. We found that genes with mammoth-specific amino acid changes are enriched in functions related to circadian biology, skin and hair development and physiology, lipid metabolism, adipose development and physiology, and temperature sensation. Finally, we resurrected and functionally tested the mammoth and ancestral elephant TRPV3 gene, which encodes a temperature-sensitive transient receptor potential (thermoTRP) channel involved in thermal sensation and hair growth, and we show that a single mammoth-specific amino acid substitution in an otherwise highly conserved region of the TRPV3 channel strongly affects its temperature sensitivity. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Cell Reports 12 2 217 228
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Biology (General)
QH301-705.5
spellingShingle Biology (General)
QH301-705.5
Vincent J. Lynch
Oscar C. Bedoya-Reina
Aakrosh Ratan
Michael Sulak
Daniela I. Drautz-Moses
George H. Perry
Webb Miller
Stephan C. Schuster
Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
topic_facet Biology (General)
QH301-705.5
description Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asian elephants and two woolly mammoths, and we identified and functionally annotated genetic changes unique to woolly mammoths. We found that genes with mammoth-specific amino acid changes are enriched in functions related to circadian biology, skin and hair development and physiology, lipid metabolism, adipose development and physiology, and temperature sensation. Finally, we resurrected and functionally tested the mammoth and ancestral elephant TRPV3 gene, which encodes a temperature-sensitive transient receptor potential (thermoTRP) channel involved in thermal sensation and hair growth, and we show that a single mammoth-specific amino acid substitution in an otherwise highly conserved region of the TRPV3 channel strongly affects its temperature sensitivity.
format Article in Journal/Newspaper
author Vincent J. Lynch
Oscar C. Bedoya-Reina
Aakrosh Ratan
Michael Sulak
Daniela I. Drautz-Moses
George H. Perry
Webb Miller
Stephan C. Schuster
author_facet Vincent J. Lynch
Oscar C. Bedoya-Reina
Aakrosh Ratan
Michael Sulak
Daniela I. Drautz-Moses
George H. Perry
Webb Miller
Stephan C. Schuster
author_sort Vincent J. Lynch
title Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_short Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_full Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_fullStr Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_full_unstemmed Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_sort elephantid genomes reveal the molecular bases of woolly mammoth adaptations to the arctic
publisher Elsevier
publishDate 2015
url https://doi.org/10.1016/j.celrep.2015.06.027
https://doaj.org/article/308877f45d9448138e4c521937ee48f1
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Cell Reports, Vol 12, Iss 2, Pp 217-228 (2015)
op_relation http://www.sciencedirect.com/science/article/pii/S2211124715006397
https://doaj.org/toc/2211-1247
2211-1247
doi:10.1016/j.celrep.2015.06.027
https://doaj.org/article/308877f45d9448138e4c521937ee48f1
op_doi https://doi.org/10.1016/j.celrep.2015.06.027
container_title Cell Reports
container_volume 12
container_issue 2
container_start_page 217
op_container_end_page 228
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