Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome
Integration of microbiological data and geographical locations is necessary to understand the spatiotemporal patterns of the microbial diversity of an ecosystem. The Geographic Information System (GIS) to map and catalogue the data on the actinobacterial diversity of the Southern Ocean waters was co...
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ftdoajarticles:oai:doaj.org/article:2f760897583f428e8474bd7043d05456 2023-05-15T13:38:55+02:00 Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome P. Sivasankar K. Priyanka Bhagwan Rekadwad K. Sivakumar T. Thangaradjou S. Poongodi R. Manimurali P.V. Bhaskar N. Anilkumar 2018-04-01T00:00:00Z https://doi.org/10.1016/j.dib.2018.02.054 https://doaj.org/article/2f760897583f428e8474bd7043d05456 EN eng Elsevier http://www.sciencedirect.com/science/article/pii/S2352340918301744 https://doaj.org/toc/2352-3409 2352-3409 doi:10.1016/j.dib.2018.02.054 https://doaj.org/article/2f760897583f428e8474bd7043d05456 Data in Brief, Vol 17, Iss , Pp 1307-1313 (2018) Computer applications to medicine. Medical informatics R858-859.7 Science (General) Q1-390 article 2018 ftdoajarticles https://doi.org/10.1016/j.dib.2018.02.054 2023-01-08T01:24:30Z Integration of microbiological data and geographical locations is necessary to understand the spatiotemporal patterns of the microbial diversity of an ecosystem. The Geographic Information System (GIS) to map and catalogue the data on the actinobacterial diversity of the Southern Ocean waters was completed through sampling and analysis. Water samples collected at two sampling stations viz. Polar Front 1 (Station 1) and Polar Front 2 (Station 2) during 7th Indian Scientific Expedition to the Indian Ocean Sector of the Southern Ocean (SOE-2012-13) were used for analysis. At the outset, two different genera of Actinobacteria were recorded at both sampling stations. Streptomyces was the dominanted with the high score (> 60%), followed by Nocardiopsis (< 30%) at both the sampling stations-Polar Front 1 and Polar Front 2-along with other invasive genera such as Agrococcus, Arthrobacter, Cryobacterium, Curtobacterium, Microbacterium, Marisediminicola, Rhodococcus and Kocuria. This data will help to discriminate the diversity and distribution pattern of the Actinobacteria in the Polar Frontal Region of the Southern Ocean waters. It is a novel approach useful for geospatial cataloguing of microbial diversity from extreme niches and in various environmental gradations. Furthermore, this research work will act as the milestone for bioprospecting of microbial communities and their products having potential applications in healthcare, agriculture and beneficial to mankind. Hence, this research work would have significance in creating a database on microbial communities of the Antarctic ecosystem. Keywords: Antarctica, Marine actinobacteria, Southern ocean, GIS, Polar Frontal waters, Microbiome Article in Journal/Newspaper Antarc* Antarctic Antarctica Southern Ocean Directory of Open Access Journals: DOAJ Articles Antarctic Southern Ocean The Antarctic Indian Data in Brief 17 1307 1313 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Computer applications to medicine. Medical informatics R858-859.7 Science (General) Q1-390 |
spellingShingle |
Computer applications to medicine. Medical informatics R858-859.7 Science (General) Q1-390 P. Sivasankar K. Priyanka Bhagwan Rekadwad K. Sivakumar T. Thangaradjou S. Poongodi R. Manimurali P.V. Bhaskar N. Anilkumar Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
topic_facet |
Computer applications to medicine. Medical informatics R858-859.7 Science (General) Q1-390 |
description |
Integration of microbiological data and geographical locations is necessary to understand the spatiotemporal patterns of the microbial diversity of an ecosystem. The Geographic Information System (GIS) to map and catalogue the data on the actinobacterial diversity of the Southern Ocean waters was completed through sampling and analysis. Water samples collected at two sampling stations viz. Polar Front 1 (Station 1) and Polar Front 2 (Station 2) during 7th Indian Scientific Expedition to the Indian Ocean Sector of the Southern Ocean (SOE-2012-13) were used for analysis. At the outset, two different genera of Actinobacteria were recorded at both sampling stations. Streptomyces was the dominanted with the high score (> 60%), followed by Nocardiopsis (< 30%) at both the sampling stations-Polar Front 1 and Polar Front 2-along with other invasive genera such as Agrococcus, Arthrobacter, Cryobacterium, Curtobacterium, Microbacterium, Marisediminicola, Rhodococcus and Kocuria. This data will help to discriminate the diversity and distribution pattern of the Actinobacteria in the Polar Frontal Region of the Southern Ocean waters. It is a novel approach useful for geospatial cataloguing of microbial diversity from extreme niches and in various environmental gradations. Furthermore, this research work will act as the milestone for bioprospecting of microbial communities and their products having potential applications in healthcare, agriculture and beneficial to mankind. Hence, this research work would have significance in creating a database on microbial communities of the Antarctic ecosystem. Keywords: Antarctica, Marine actinobacteria, Southern ocean, GIS, Polar Frontal waters, Microbiome |
format |
Article in Journal/Newspaper |
author |
P. Sivasankar K. Priyanka Bhagwan Rekadwad K. Sivakumar T. Thangaradjou S. Poongodi R. Manimurali P.V. Bhaskar N. Anilkumar |
author_facet |
P. Sivasankar K. Priyanka Bhagwan Rekadwad K. Sivakumar T. Thangaradjou S. Poongodi R. Manimurali P.V. Bhaskar N. Anilkumar |
author_sort |
P. Sivasankar |
title |
Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
title_short |
Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
title_full |
Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
title_fullStr |
Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
title_full_unstemmed |
Actinobacterial community structure in the Polar Frontal waters of the Southern Ocean of the Antarctica using Geographic Information System (GIS): A novel approach to study Ocean Microbiome |
title_sort |
actinobacterial community structure in the polar frontal waters of the southern ocean of the antarctica using geographic information system (gis): a novel approach to study ocean microbiome |
publisher |
Elsevier |
publishDate |
2018 |
url |
https://doi.org/10.1016/j.dib.2018.02.054 https://doaj.org/article/2f760897583f428e8474bd7043d05456 |
geographic |
Antarctic Southern Ocean The Antarctic Indian |
geographic_facet |
Antarctic Southern Ocean The Antarctic Indian |
genre |
Antarc* Antarctic Antarctica Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica Southern Ocean |
op_source |
Data in Brief, Vol 17, Iss , Pp 1307-1313 (2018) |
op_relation |
http://www.sciencedirect.com/science/article/pii/S2352340918301744 https://doaj.org/toc/2352-3409 2352-3409 doi:10.1016/j.dib.2018.02.054 https://doaj.org/article/2f760897583f428e8474bd7043d05456 |
op_doi |
https://doi.org/10.1016/j.dib.2018.02.054 |
container_title |
Data in Brief |
container_volume |
17 |
container_start_page |
1307 |
op_container_end_page |
1313 |
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1766112348921135104 |