Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)

Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The specie...

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Published in:Ecology and Evolution
Main Authors: Piotr Androsiuk, Katarzyna J. Chwedorzewska, Justyna Dulska, Sylwia Milarska, Irena Giełwanowska
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2021
Subjects:
Online Access:https://doi.org/10.1002/ece3.7095
https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515
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spelling ftdoajarticles:oai:doaj.org/article:2f4c6fded42b45e68c6b12e2fbf3c515 2023-05-15T13:37:52+02:00 Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) Piotr Androsiuk Katarzyna J. Chwedorzewska Justyna Dulska Sylwia Milarska Irena Giełwanowska 2021-01-01T00:00:00Z https://doi.org/10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 EN eng Wiley https://doi.org/10.1002/ece3.7095 https://doaj.org/toc/2045-7758 2045-7758 doi:10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 Ecology and Evolution, Vol 11, Iss 1, Pp 648-663 (2021) Antarctic hairgrass Antarctica genetic diversity iPBS King George Island Ecology QH540-549.5 article 2021 ftdoajarticles https://doi.org/10.1002/ece3.7095 2022-12-31T06:49:21Z Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The species is a unique example of an organism that can successfully colonize inhospitable regions due to its phenomenal ability to adapt to both the local mosaic of microhabitats and to general climatic fluctuations. For this reason, D. antarctica has been widely investigated in studies analyzing morphophysiological and biochemical responses to various abiotic stresses (frost, drought, salinity, increased UV radiation). However, there is little evidence to indicate whether the observed polymorphism is accompanied by the corresponding genetic variation. In the present study, retrotransposon‐based iPBS markers were used to trace the genetic variation of D. antarctica collected in nine sites of the Arctowski oasis on King George Island (Western Antarctic). The genotyping of 165 individuals from nine populations with seven iPBS primers revealed 125 amplification products, 15 of which (12%) were polymorphic, with an average of 5.6% polymorphic fragments per population. Only one of the polymorphic fragments, observed in population 6, was represented as a private band. The analyzed specimens were characterized by low genetic diversity (uHe = 0.021, I = 0.030) and high population differentiation (FST = 0.4874). An analysis of Fu's FS statistics and mismatch distribution in most populations (excluding population 2, 6 and 9) revealed demographic/spatial expansion, whereas significant traces of reduction in effective population size were found in three populations (1, 3 and 5). The iPBS markers revealed genetic polymorphism of D. antarctica, which could be attributed to the mobilization of random transposable elements, unique features of reproductive biology, and/or geographic location of the examined populations. Article in Journal/Newspaper Antarc* Antarctic Antarctica King George Island Directory of Open Access Journals: DOAJ Articles Antarctic King George Island Arctowski ENVELOPE(-58.467,-58.467,-62.167,-62.167) Ecology and Evolution 11 1 648 663
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Antarctic hairgrass
Antarctica
genetic diversity
iPBS
King George Island
Ecology
QH540-549.5
spellingShingle Antarctic hairgrass
Antarctica
genetic diversity
iPBS
King George Island
Ecology
QH540-549.5
Piotr Androsiuk
Katarzyna J. Chwedorzewska
Justyna Dulska
Sylwia Milarska
Irena Giełwanowska
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
topic_facet Antarctic hairgrass
Antarctica
genetic diversity
iPBS
King George Island
Ecology
QH540-549.5
description Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The species is a unique example of an organism that can successfully colonize inhospitable regions due to its phenomenal ability to adapt to both the local mosaic of microhabitats and to general climatic fluctuations. For this reason, D. antarctica has been widely investigated in studies analyzing morphophysiological and biochemical responses to various abiotic stresses (frost, drought, salinity, increased UV radiation). However, there is little evidence to indicate whether the observed polymorphism is accompanied by the corresponding genetic variation. In the present study, retrotransposon‐based iPBS markers were used to trace the genetic variation of D. antarctica collected in nine sites of the Arctowski oasis on King George Island (Western Antarctic). The genotyping of 165 individuals from nine populations with seven iPBS primers revealed 125 amplification products, 15 of which (12%) were polymorphic, with an average of 5.6% polymorphic fragments per population. Only one of the polymorphic fragments, observed in population 6, was represented as a private band. The analyzed specimens were characterized by low genetic diversity (uHe = 0.021, I = 0.030) and high population differentiation (FST = 0.4874). An analysis of Fu's FS statistics and mismatch distribution in most populations (excluding population 2, 6 and 9) revealed demographic/spatial expansion, whereas significant traces of reduction in effective population size were found in three populations (1, 3 and 5). The iPBS markers revealed genetic polymorphism of D. antarctica, which could be attributed to the mobilization of random transposable elements, unique features of reproductive biology, and/or geographic location of the examined populations.
format Article in Journal/Newspaper
author Piotr Androsiuk
Katarzyna J. Chwedorzewska
Justyna Dulska
Sylwia Milarska
Irena Giełwanowska
author_facet Piotr Androsiuk
Katarzyna J. Chwedorzewska
Justyna Dulska
Sylwia Milarska
Irena Giełwanowska
author_sort Piotr Androsiuk
title Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
title_short Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
title_full Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
title_fullStr Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
title_full_unstemmed Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
title_sort retrotransposon‐based genetic diversity of deschampsia antarctica desv. from king george island (maritime antarctic)
publisher Wiley
publishDate 2021
url https://doi.org/10.1002/ece3.7095
https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515
long_lat ENVELOPE(-58.467,-58.467,-62.167,-62.167)
geographic Antarctic
King George Island
Arctowski
geographic_facet Antarctic
King George Island
Arctowski
genre Antarc*
Antarctic
Antarctica
King George Island
genre_facet Antarc*
Antarctic
Antarctica
King George Island
op_source Ecology and Evolution, Vol 11, Iss 1, Pp 648-663 (2021)
op_relation https://doi.org/10.1002/ece3.7095
https://doaj.org/toc/2045-7758
2045-7758
doi:10.1002/ece3.7095
https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515
op_doi https://doi.org/10.1002/ece3.7095
container_title Ecology and Evolution
container_volume 11
container_issue 1
container_start_page 648
op_container_end_page 663
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