Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The specie...
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ftdoajarticles:oai:doaj.org/article:2f4c6fded42b45e68c6b12e2fbf3c515 2023-05-15T13:37:52+02:00 Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) Piotr Androsiuk Katarzyna J. Chwedorzewska Justyna Dulska Sylwia Milarska Irena Giełwanowska 2021-01-01T00:00:00Z https://doi.org/10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 EN eng Wiley https://doi.org/10.1002/ece3.7095 https://doaj.org/toc/2045-7758 2045-7758 doi:10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 Ecology and Evolution, Vol 11, Iss 1, Pp 648-663 (2021) Antarctic hairgrass Antarctica genetic diversity iPBS King George Island Ecology QH540-549.5 article 2021 ftdoajarticles https://doi.org/10.1002/ece3.7095 2022-12-31T06:49:21Z Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The species is a unique example of an organism that can successfully colonize inhospitable regions due to its phenomenal ability to adapt to both the local mosaic of microhabitats and to general climatic fluctuations. For this reason, D. antarctica has been widely investigated in studies analyzing morphophysiological and biochemical responses to various abiotic stresses (frost, drought, salinity, increased UV radiation). However, there is little evidence to indicate whether the observed polymorphism is accompanied by the corresponding genetic variation. In the present study, retrotransposon‐based iPBS markers were used to trace the genetic variation of D. antarctica collected in nine sites of the Arctowski oasis on King George Island (Western Antarctic). The genotyping of 165 individuals from nine populations with seven iPBS primers revealed 125 amplification products, 15 of which (12%) were polymorphic, with an average of 5.6% polymorphic fragments per population. Only one of the polymorphic fragments, observed in population 6, was represented as a private band. The analyzed specimens were characterized by low genetic diversity (uHe = 0.021, I = 0.030) and high population differentiation (FST = 0.4874). An analysis of Fu's FS statistics and mismatch distribution in most populations (excluding population 2, 6 and 9) revealed demographic/spatial expansion, whereas significant traces of reduction in effective population size were found in three populations (1, 3 and 5). The iPBS markers revealed genetic polymorphism of D. antarctica, which could be attributed to the mobilization of random transposable elements, unique features of reproductive biology, and/or geographic location of the examined populations. Article in Journal/Newspaper Antarc* Antarctic Antarctica King George Island Directory of Open Access Journals: DOAJ Articles Antarctic King George Island Arctowski ENVELOPE(-58.467,-58.467,-62.167,-62.167) Ecology and Evolution 11 1 648 663 |
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Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Antarctic hairgrass Antarctica genetic diversity iPBS King George Island Ecology QH540-549.5 |
spellingShingle |
Antarctic hairgrass Antarctica genetic diversity iPBS King George Island Ecology QH540-549.5 Piotr Androsiuk Katarzyna J. Chwedorzewska Justyna Dulska Sylwia Milarska Irena Giełwanowska Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
topic_facet |
Antarctic hairgrass Antarctica genetic diversity iPBS King George Island Ecology QH540-549.5 |
description |
Abstract Deschampsia antarctica Desv. can be found in diverse Antarctic habitats which may vary considerably in terms of environmental conditions and soil properties. As a result, the species is characterized by wide ecotypic variation in terms of both morphological and anatomical traits. The species is a unique example of an organism that can successfully colonize inhospitable regions due to its phenomenal ability to adapt to both the local mosaic of microhabitats and to general climatic fluctuations. For this reason, D. antarctica has been widely investigated in studies analyzing morphophysiological and biochemical responses to various abiotic stresses (frost, drought, salinity, increased UV radiation). However, there is little evidence to indicate whether the observed polymorphism is accompanied by the corresponding genetic variation. In the present study, retrotransposon‐based iPBS markers were used to trace the genetic variation of D. antarctica collected in nine sites of the Arctowski oasis on King George Island (Western Antarctic). The genotyping of 165 individuals from nine populations with seven iPBS primers revealed 125 amplification products, 15 of which (12%) were polymorphic, with an average of 5.6% polymorphic fragments per population. Only one of the polymorphic fragments, observed in population 6, was represented as a private band. The analyzed specimens were characterized by low genetic diversity (uHe = 0.021, I = 0.030) and high population differentiation (FST = 0.4874). An analysis of Fu's FS statistics and mismatch distribution in most populations (excluding population 2, 6 and 9) revealed demographic/spatial expansion, whereas significant traces of reduction in effective population size were found in three populations (1, 3 and 5). The iPBS markers revealed genetic polymorphism of D. antarctica, which could be attributed to the mobilization of random transposable elements, unique features of reproductive biology, and/or geographic location of the examined populations. |
format |
Article in Journal/Newspaper |
author |
Piotr Androsiuk Katarzyna J. Chwedorzewska Justyna Dulska Sylwia Milarska Irena Giełwanowska |
author_facet |
Piotr Androsiuk Katarzyna J. Chwedorzewska Justyna Dulska Sylwia Milarska Irena Giełwanowska |
author_sort |
Piotr Androsiuk |
title |
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
title_short |
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
title_full |
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
title_fullStr |
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
title_full_unstemmed |
Retrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic) |
title_sort |
retrotransposon‐based genetic diversity of deschampsia antarctica desv. from king george island (maritime antarctic) |
publisher |
Wiley |
publishDate |
2021 |
url |
https://doi.org/10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 |
long_lat |
ENVELOPE(-58.467,-58.467,-62.167,-62.167) |
geographic |
Antarctic King George Island Arctowski |
geographic_facet |
Antarctic King George Island Arctowski |
genre |
Antarc* Antarctic Antarctica King George Island |
genre_facet |
Antarc* Antarctic Antarctica King George Island |
op_source |
Ecology and Evolution, Vol 11, Iss 1, Pp 648-663 (2021) |
op_relation |
https://doi.org/10.1002/ece3.7095 https://doaj.org/toc/2045-7758 2045-7758 doi:10.1002/ece3.7095 https://doaj.org/article/2f4c6fded42b45e68c6b12e2fbf3c515 |
op_doi |
https://doi.org/10.1002/ece3.7095 |
container_title |
Ecology and Evolution |
container_volume |
11 |
container_issue |
1 |
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648 |
op_container_end_page |
663 |
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1766098498526117888 |