Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach

The ability to constrain the mechanisms that transport organic carbon into the deep ocean is complicated by the multiple physical, chemical, and ecological processes that intersect to create, transform, and transport particles in the ocean. In this paper we develop and parameterize a data-assimilati...

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Published in:Biogeosciences
Main Authors: M. R. Stukel, M. Décima, M. R. Landry
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2022
Subjects:
Online Access:https://doi.org/10.5194/bg-19-3595-2022
https://doaj.org/article/29aa842d5c1549c1b9a2b13b6c616d40
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spelling ftdoajarticles:oai:doaj.org/article:29aa842d5c1549c1b9a2b13b6c616d40 2023-05-15T18:25:44+02:00 Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach M. R. Stukel M. Décima M. R. Landry 2022-08-01T00:00:00Z https://doi.org/10.5194/bg-19-3595-2022 https://doaj.org/article/29aa842d5c1549c1b9a2b13b6c616d40 EN eng Copernicus Publications https://bg.copernicus.org/articles/19/3595/2022/bg-19-3595-2022.pdf https://doaj.org/toc/1726-4170 https://doaj.org/toc/1726-4189 doi:10.5194/bg-19-3595-2022 1726-4170 1726-4189 https://doaj.org/article/29aa842d5c1549c1b9a2b13b6c616d40 Biogeosciences, Vol 19, Pp 3595-3624 (2022) Ecology QH540-549.5 Life QH501-531 Geology QE1-996.5 article 2022 ftdoajarticles https://doi.org/10.5194/bg-19-3595-2022 2022-12-31T02:04:40Z The ability to constrain the mechanisms that transport organic carbon into the deep ocean is complicated by the multiple physical, chemical, and ecological processes that intersect to create, transform, and transport particles in the ocean. In this paper we develop and parameterize a data-assimilative model of the multiple pathways of the biological carbon pump (NEMURO BCP ). The mechanistic model is designed to represent sinking particle flux, active transport by vertically migrating zooplankton, and passive transport by subduction and vertical mixing, while also explicitly representing multiple biological and chemical properties measured directly in the field (including nutrients, phytoplankton and zooplankton taxa, carbon dioxide and oxygen, nitrogen isotopes, and 234 Thorium). Using 30 different data types (including standing stock and rate measurements related to nutrients, phytoplankton, zooplankton, and non-living organic matter) from Lagrangian experiments conducted on 11 cruises from four ocean regions, we conduct an objective statistical parameterization of the model and generate 1 million different potential parameter sets that are used for ensemble model simulations. The model simulates in situ parameters that were assimilated (net primary production and gravitational particle flux) and parameters that were withheld ( 234 Thorium and nitrogen isotopes) with reasonable accuracy. Model results show that gravitational flux of sinking particles and vertical mixing of organic matter from the euphotic zone are more important biological pump pathways than active transport by vertically migrating zooplankton. However, these processes are regionally variable, with sinking particles most important in oligotrophic areas of the Gulf of Mexico and California Current, sinking particles and vertical mixing roughly equivalent in productive coastal upwelling regions and the subtropical front in the Southern Ocean, and active transport an important contributor in the eastern tropical Pacific. We further find that ... Article in Journal/Newspaper Southern Ocean Directory of Open Access Journals: DOAJ Articles Southern Ocean Pacific Biogeosciences 19 15 3595 3624
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
spellingShingle Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
M. R. Stukel
M. Décima
M. R. Landry
Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
topic_facet Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
description The ability to constrain the mechanisms that transport organic carbon into the deep ocean is complicated by the multiple physical, chemical, and ecological processes that intersect to create, transform, and transport particles in the ocean. In this paper we develop and parameterize a data-assimilative model of the multiple pathways of the biological carbon pump (NEMURO BCP ). The mechanistic model is designed to represent sinking particle flux, active transport by vertically migrating zooplankton, and passive transport by subduction and vertical mixing, while also explicitly representing multiple biological and chemical properties measured directly in the field (including nutrients, phytoplankton and zooplankton taxa, carbon dioxide and oxygen, nitrogen isotopes, and 234 Thorium). Using 30 different data types (including standing stock and rate measurements related to nutrients, phytoplankton, zooplankton, and non-living organic matter) from Lagrangian experiments conducted on 11 cruises from four ocean regions, we conduct an objective statistical parameterization of the model and generate 1 million different potential parameter sets that are used for ensemble model simulations. The model simulates in situ parameters that were assimilated (net primary production and gravitational particle flux) and parameters that were withheld ( 234 Thorium and nitrogen isotopes) with reasonable accuracy. Model results show that gravitational flux of sinking particles and vertical mixing of organic matter from the euphotic zone are more important biological pump pathways than active transport by vertically migrating zooplankton. However, these processes are regionally variable, with sinking particles most important in oligotrophic areas of the Gulf of Mexico and California Current, sinking particles and vertical mixing roughly equivalent in productive coastal upwelling regions and the subtropical front in the Southern Ocean, and active transport an important contributor in the eastern tropical Pacific. We further find that ...
format Article in Journal/Newspaper
author M. R. Stukel
M. Décima
M. R. Landry
author_facet M. R. Stukel
M. Décima
M. R. Landry
author_sort M. R. Stukel
title Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
title_short Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
title_full Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
title_fullStr Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
title_full_unstemmed Quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
title_sort quantifying biological carbon pump pathways with a data-constrained mechanistic model ensemble approach
publisher Copernicus Publications
publishDate 2022
url https://doi.org/10.5194/bg-19-3595-2022
https://doaj.org/article/29aa842d5c1549c1b9a2b13b6c616d40
geographic Southern Ocean
Pacific
geographic_facet Southern Ocean
Pacific
genre Southern Ocean
genre_facet Southern Ocean
op_source Biogeosciences, Vol 19, Pp 3595-3624 (2022)
op_relation https://bg.copernicus.org/articles/19/3595/2022/bg-19-3595-2022.pdf
https://doaj.org/toc/1726-4170
https://doaj.org/toc/1726-4189
doi:10.5194/bg-19-3595-2022
1726-4170
1726-4189
https://doaj.org/article/29aa842d5c1549c1b9a2b13b6c616d40
op_doi https://doi.org/10.5194/bg-19-3595-2022
container_title Biogeosciences
container_volume 19
container_issue 15
container_start_page 3595
op_container_end_page 3624
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