The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. Howev...
Published in: | Mitochondrial DNA Part B |
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Taylor & Francis Group
2020
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ftdoajarticles:oai:doaj.org/article:26452ee94ab14d478f95ea24e9154ced 2023-12-03T10:21:08+01:00 The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics Jin-Hyeop Jeong Seongho Ryu Won Kim 2020-07-01T00:00:00Z https://doi.org/10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced EN eng Taylor & Francis Group http://dx.doi.org/10.1080/23802359.2020.1780974 https://doaj.org/toc/2380-2359 2380-2359 doi:10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced Mitochondrial DNA. Part B. Resources, Vol 5, Iss 3, Pp 2550-2552 (2020) mitogenome decapoda majoidea chionoecetes opilio atypical trnas Genetics QH426-470 article 2020 ftdoajarticles https://doi.org/10.1080/23802359.2020.1780974 2023-11-05T01:36:38Z The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. However, the mitogenome shows unique characteristics; long terminal amino acids, loss or addition of 3 PCGs, a 1216 bp long putative D-loop region, and peculiar secondary structures of 5 tRNAs. The concatenated amino acid sequences of 13 PCGs were used to analyze the phylogenetic tree, which well supported the monophyly of brachyuran clades of Majoidea, Heterotremata, Thoracotremata, and Eubrachyura. Article in Journal/Newspaper Chionoecetes opilio Directory of Open Access Journals: DOAJ Articles Mitochondrial DNA Part B 5 3 2550 2552 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
mitogenome decapoda majoidea chionoecetes opilio atypical trnas Genetics QH426-470 |
spellingShingle |
mitogenome decapoda majoidea chionoecetes opilio atypical trnas Genetics QH426-470 Jin-Hyeop Jeong Seongho Ryu Won Kim The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
topic_facet |
mitogenome decapoda majoidea chionoecetes opilio atypical trnas Genetics QH426-470 |
description |
The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. However, the mitogenome shows unique characteristics; long terminal amino acids, loss or addition of 3 PCGs, a 1216 bp long putative D-loop region, and peculiar secondary structures of 5 tRNAs. The concatenated amino acid sequences of 13 PCGs were used to analyze the phylogenetic tree, which well supported the monophyly of brachyuran clades of Majoidea, Heterotremata, Thoracotremata, and Eubrachyura. |
format |
Article in Journal/Newspaper |
author |
Jin-Hyeop Jeong Seongho Ryu Won Kim |
author_facet |
Jin-Hyeop Jeong Seongho Ryu Won Kim |
author_sort |
Jin-Hyeop Jeong |
title |
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
title_short |
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
title_full |
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
title_fullStr |
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
title_full_unstemmed |
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics |
title_sort |
complete mitogenome of the chionoecetes opilio (crustacea: decapoda: oregoniidae) and its unique characteristics |
publisher |
Taylor & Francis Group |
publishDate |
2020 |
url |
https://doi.org/10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced |
genre |
Chionoecetes opilio |
genre_facet |
Chionoecetes opilio |
op_source |
Mitochondrial DNA. Part B. Resources, Vol 5, Iss 3, Pp 2550-2552 (2020) |
op_relation |
http://dx.doi.org/10.1080/23802359.2020.1780974 https://doaj.org/toc/2380-2359 2380-2359 doi:10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced |
op_doi |
https://doi.org/10.1080/23802359.2020.1780974 |
container_title |
Mitochondrial DNA Part B |
container_volume |
5 |
container_issue |
3 |
container_start_page |
2550 |
op_container_end_page |
2552 |
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1784268698128744448 |