The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics

The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. Howev...

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Published in:Mitochondrial DNA Part B
Main Authors: Jin-Hyeop Jeong, Seongho Ryu, Won Kim
Format: Article in Journal/Newspaper
Language:English
Published: Taylor & Francis Group 2020
Subjects:
Online Access:https://doi.org/10.1080/23802359.2020.1780974
https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced
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spelling ftdoajarticles:oai:doaj.org/article:26452ee94ab14d478f95ea24e9154ced 2023-12-03T10:21:08+01:00 The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics Jin-Hyeop Jeong Seongho Ryu Won Kim 2020-07-01T00:00:00Z https://doi.org/10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced EN eng Taylor & Francis Group http://dx.doi.org/10.1080/23802359.2020.1780974 https://doaj.org/toc/2380-2359 2380-2359 doi:10.1080/23802359.2020.1780974 https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced Mitochondrial DNA. Part B. Resources, Vol 5, Iss 3, Pp 2550-2552 (2020) mitogenome decapoda majoidea chionoecetes opilio atypical trnas Genetics QH426-470 article 2020 ftdoajarticles https://doi.org/10.1080/23802359.2020.1780974 2023-11-05T01:36:38Z The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. However, the mitogenome shows unique characteristics; long terminal amino acids, loss or addition of 3 PCGs, a 1216 bp long putative D-loop region, and peculiar secondary structures of 5 tRNAs. The concatenated amino acid sequences of 13 PCGs were used to analyze the phylogenetic tree, which well supported the monophyly of brachyuran clades of Majoidea, Heterotremata, Thoracotremata, and Eubrachyura. Article in Journal/Newspaper Chionoecetes opilio Directory of Open Access Journals: DOAJ Articles Mitochondrial DNA Part B 5 3 2550 2552
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic mitogenome
decapoda
majoidea
chionoecetes opilio
atypical trnas
Genetics
QH426-470
spellingShingle mitogenome
decapoda
majoidea
chionoecetes opilio
atypical trnas
Genetics
QH426-470
Jin-Hyeop Jeong
Seongho Ryu
Won Kim
The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
topic_facet mitogenome
decapoda
majoidea
chionoecetes opilio
atypical trnas
Genetics
QH426-470
description The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. However, the mitogenome shows unique characteristics; long terminal amino acids, loss or addition of 3 PCGs, a 1216 bp long putative D-loop region, and peculiar secondary structures of 5 tRNAs. The concatenated amino acid sequences of 13 PCGs were used to analyze the phylogenetic tree, which well supported the monophyly of brachyuran clades of Majoidea, Heterotremata, Thoracotremata, and Eubrachyura.
format Article in Journal/Newspaper
author Jin-Hyeop Jeong
Seongho Ryu
Won Kim
author_facet Jin-Hyeop Jeong
Seongho Ryu
Won Kim
author_sort Jin-Hyeop Jeong
title The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
title_short The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
title_full The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
title_fullStr The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
title_full_unstemmed The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics
title_sort complete mitogenome of the chionoecetes opilio (crustacea: decapoda: oregoniidae) and its unique characteristics
publisher Taylor & Francis Group
publishDate 2020
url https://doi.org/10.1080/23802359.2020.1780974
https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced
genre Chionoecetes opilio
genre_facet Chionoecetes opilio
op_source Mitochondrial DNA. Part B. Resources, Vol 5, Iss 3, Pp 2550-2552 (2020)
op_relation http://dx.doi.org/10.1080/23802359.2020.1780974
https://doaj.org/toc/2380-2359
2380-2359
doi:10.1080/23802359.2020.1780974
https://doaj.org/article/26452ee94ab14d478f95ea24e9154ced
op_doi https://doi.org/10.1080/23802359.2020.1780974
container_title Mitochondrial DNA Part B
container_volume 5
container_issue 3
container_start_page 2550
op_container_end_page 2552
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