Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer

During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during...

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Published in:Biogeosciences
Main Authors: S. Balzano, P. Gourvil, R. Siano, M. Chanoine, D. Marie, S. Lessard, D. Sarno, D. Vaulot
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2012
Subjects:
Online Access:https://doi.org/10.5194/bg-9-4553-2012
https://doaj.org/article/2261349d8e3f40ccb23712a35f54e22a
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spelling ftdoajarticles:oai:doaj.org/article:2261349d8e3f40ccb23712a35f54e22a 2023-05-15T14:43:18+02:00 Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer S. Balzano P. Gourvil R. Siano M. Chanoine D. Marie S. Lessard D. Sarno D. Vaulot 2012-11-01T00:00:00Z https://doi.org/10.5194/bg-9-4553-2012 https://doaj.org/article/2261349d8e3f40ccb23712a35f54e22a EN eng Copernicus Publications http://www.biogeosciences.net/9/4553/2012/bg-9-4553-2012.pdf https://doaj.org/toc/1726-4170 https://doaj.org/toc/1726-4189 doi:10.5194/bg-9-4553-2012 1726-4170 1726-4189 https://doaj.org/article/2261349d8e3f40ccb23712a35f54e22a Biogeosciences, Vol 9, Iss 11, Pp 4553-4571 (2012) Ecology QH540-549.5 Life QH501-531 Geology QE1-996.5 article 2012 ftdoajarticles https://doi.org/10.5194/bg-9-4553-2012 2022-12-31T01:24:18Z During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during the summer season, strains were isolated by flow cytometry sorting (FCS) and single cell pipetting before or after phytoplankton enrichment of seawater samples. Strains were isolated both onboard and back in the laboratory and cultured at 4 °C under light/dark conditions. Overall, we isolated and characterised by light microscopy and 18 S rRNA gene sequencing 104 strains of photosynthetic flagellates which grouped into 21 genotypes (defined by 99.5% 18 S rRNA gene sequence similarity), mainly affiliated to Chlorophyta and Heterokontophyta. The taxon most frequently isolated was an Arctic ecotype of the green algal genus Micromonas (Arctic Micromonas ), which was nearly the only phytoplankter recovered within the picoplankton (< 2 μm) size range. Strains of Arctic Micromonas as well as other strains from the same class (Mamiellophyceae) were identified in further detail by sequencing the internal transcribed spacer (ITS) region of the rRNA operon. The MALINA Micromonas strains share identical 18 S rRNA and ITS sequences suggesting high genetic homogeneity within Arctic Micromonas . Three other Mamiellophyceae strains likely belong to a new genus. Other green algae from the genera Nephroselmis, Chlamydomonas , and Pyramimonas were also isolated, whereas Heterokontophyta included some unidentified Pelagophyceae, Dictyochophyceae (Pedinellales), and Chrysophyceae ( Dinobryon faculiferum ). Moreover, we isolated some Cryptophyceae ( Rhodomonas sp.) as well as a few Prymnesiophyceae and dinoflagellates. We identified the dinoflagellate Woloszynskia cincta by scanning electron microscopy (SEM) and 28 S rRNA gene sequencing. Our morphological analyses show that this species possess the diagnostic features of the genus ... Article in Journal/Newspaper Arctic Beaufort Sea Bering Strait Chukchi Chukchi Sea Phytoplankton Directory of Open Access Journals: DOAJ Articles Arctic Bering Strait Chukchi Sea Pacific Biogeosciences 9 11 4553 4571
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
spellingShingle Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
S. Balzano
P. Gourvil
R. Siano
M. Chanoine
D. Marie
S. Lessard
D. Sarno
D. Vaulot
Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
topic_facet Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
description During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during the summer season, strains were isolated by flow cytometry sorting (FCS) and single cell pipetting before or after phytoplankton enrichment of seawater samples. Strains were isolated both onboard and back in the laboratory and cultured at 4 °C under light/dark conditions. Overall, we isolated and characterised by light microscopy and 18 S rRNA gene sequencing 104 strains of photosynthetic flagellates which grouped into 21 genotypes (defined by 99.5% 18 S rRNA gene sequence similarity), mainly affiliated to Chlorophyta and Heterokontophyta. The taxon most frequently isolated was an Arctic ecotype of the green algal genus Micromonas (Arctic Micromonas ), which was nearly the only phytoplankter recovered within the picoplankton (< 2 μm) size range. Strains of Arctic Micromonas as well as other strains from the same class (Mamiellophyceae) were identified in further detail by sequencing the internal transcribed spacer (ITS) region of the rRNA operon. The MALINA Micromonas strains share identical 18 S rRNA and ITS sequences suggesting high genetic homogeneity within Arctic Micromonas . Three other Mamiellophyceae strains likely belong to a new genus. Other green algae from the genera Nephroselmis, Chlamydomonas , and Pyramimonas were also isolated, whereas Heterokontophyta included some unidentified Pelagophyceae, Dictyochophyceae (Pedinellales), and Chrysophyceae ( Dinobryon faculiferum ). Moreover, we isolated some Cryptophyceae ( Rhodomonas sp.) as well as a few Prymnesiophyceae and dinoflagellates. We identified the dinoflagellate Woloszynskia cincta by scanning electron microscopy (SEM) and 28 S rRNA gene sequencing. Our morphological analyses show that this species possess the diagnostic features of the genus ...
format Article in Journal/Newspaper
author S. Balzano
P. Gourvil
R. Siano
M. Chanoine
D. Marie
S. Lessard
D. Sarno
D. Vaulot
author_facet S. Balzano
P. Gourvil
R. Siano
M. Chanoine
D. Marie
S. Lessard
D. Sarno
D. Vaulot
author_sort S. Balzano
title Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_short Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_full Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_fullStr Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_full_unstemmed Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_sort diversity of cultured photosynthetic flagellates in the northeast pacific and arctic oceans in summer
publisher Copernicus Publications
publishDate 2012
url https://doi.org/10.5194/bg-9-4553-2012
https://doaj.org/article/2261349d8e3f40ccb23712a35f54e22a
geographic Arctic
Bering Strait
Chukchi Sea
Pacific
geographic_facet Arctic
Bering Strait
Chukchi Sea
Pacific
genre Arctic
Beaufort Sea
Bering Strait
Chukchi
Chukchi Sea
Phytoplankton
genre_facet Arctic
Beaufort Sea
Bering Strait
Chukchi
Chukchi Sea
Phytoplankton
op_source Biogeosciences, Vol 9, Iss 11, Pp 4553-4571 (2012)
op_relation http://www.biogeosciences.net/9/4553/2012/bg-9-4553-2012.pdf
https://doaj.org/toc/1726-4170
https://doaj.org/toc/1726-4189
doi:10.5194/bg-9-4553-2012
1726-4170
1726-4189
https://doaj.org/article/2261349d8e3f40ccb23712a35f54e22a
op_doi https://doi.org/10.5194/bg-9-4553-2012
container_title Biogeosciences
container_volume 9
container_issue 11
container_start_page 4553
op_container_end_page 4571
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