Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America

Abstract Background Malaria is an important disease in many tropical countries. Rapid diagnostic tests (RDTs) are valuable tools for diagnosing malaria in remote areas. The majority of RDTs used for the diagnosis of Plasmodium falciparum are based on the detection of the specific histidine-rich prot...

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Published in:Malaria Journal
Main Authors: Gustavo Fontecha, Alejandra Pinto, Denis Escobar, Gabriela Matamoros, Bryan Ortiz
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2019
Subjects:
Online Access:https://doi.org/10.1186/s12936-019-2668-3
https://doaj.org/article/2208e4d966d043b5a6a4c1dc905959ec
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spelling ftdoajarticles:oai:doaj.org/article:2208e4d966d043b5a6a4c1dc905959ec 2023-05-15T15:11:25+02:00 Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America Gustavo Fontecha Alejandra Pinto Denis Escobar Gabriela Matamoros Bryan Ortiz 2019-01-01T00:00:00Z https://doi.org/10.1186/s12936-019-2668-3 https://doaj.org/article/2208e4d966d043b5a6a4c1dc905959ec EN eng BMC http://link.springer.com/article/10.1186/s12936-019-2668-3 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-019-2668-3 1475-2875 https://doaj.org/article/2208e4d966d043b5a6a4c1dc905959ec Malaria Journal, Vol 18, Iss 1, Pp 1-10 (2019) Malaria pfhrp2 pfhrp3 Plasmodium falciparum Rapid diagnostic test Honduras Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2019 ftdoajarticles https://doi.org/10.1186/s12936-019-2668-3 2022-12-31T03:10:32Z Abstract Background Malaria is an important disease in many tropical countries. Rapid diagnostic tests (RDTs) are valuable tools for diagnosing malaria in remote areas. The majority of RDTs used for the diagnosis of Plasmodium falciparum are based on the detection of the specific histidine-rich proteins (PfHRP2 and PfHRP3). During the last decade, the threat posed by the lack of expression of these antigens and the variability of the proteins on the diagnosis of malaria has been widely discussed. The aim of this study was to evaluate the genetic diversity of pfhrp2 and pfhrp3 of P. falciparum isolates collected in three Central American countries. Methods DNA samples were amplified and sequenced to assess the diversity of nucleotides and amino acids. A search for known epitopes within the amino acid sequence was carried out, and the sensitivity of the sequences was evaluated according to a predictive model. A phylogenetic analysis was carried out including homologous sequences from different regions of the world. Protein structures were predicted in silico. Results Five different patterns for PfHRP2 and one pattern for PfHRP3 were identified. Isolates from Central America show a high level of genetic diversity in pfhrp2; however, the amino acid sequences seem to contain enough motifs to be detected by the RDTs currently available. Conclusion It is unlikely that the variability of the pfhrp2 and pfhrp3 genes has a significant impact on the ability of the RDTs to detect the PfHRP antigens in Central America. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Malaria Journal 18 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Malaria
pfhrp2
pfhrp3
Plasmodium falciparum
Rapid diagnostic test
Honduras
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
spellingShingle Malaria
pfhrp2
pfhrp3
Plasmodium falciparum
Rapid diagnostic test
Honduras
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
Gustavo Fontecha
Alejandra Pinto
Denis Escobar
Gabriela Matamoros
Bryan Ortiz
Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
topic_facet Malaria
pfhrp2
pfhrp3
Plasmodium falciparum
Rapid diagnostic test
Honduras
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
description Abstract Background Malaria is an important disease in many tropical countries. Rapid diagnostic tests (RDTs) are valuable tools for diagnosing malaria in remote areas. The majority of RDTs used for the diagnosis of Plasmodium falciparum are based on the detection of the specific histidine-rich proteins (PfHRP2 and PfHRP3). During the last decade, the threat posed by the lack of expression of these antigens and the variability of the proteins on the diagnosis of malaria has been widely discussed. The aim of this study was to evaluate the genetic diversity of pfhrp2 and pfhrp3 of P. falciparum isolates collected in three Central American countries. Methods DNA samples were amplified and sequenced to assess the diversity of nucleotides and amino acids. A search for known epitopes within the amino acid sequence was carried out, and the sensitivity of the sequences was evaluated according to a predictive model. A phylogenetic analysis was carried out including homologous sequences from different regions of the world. Protein structures were predicted in silico. Results Five different patterns for PfHRP2 and one pattern for PfHRP3 were identified. Isolates from Central America show a high level of genetic diversity in pfhrp2; however, the amino acid sequences seem to contain enough motifs to be detected by the RDTs currently available. Conclusion It is unlikely that the variability of the pfhrp2 and pfhrp3 genes has a significant impact on the ability of the RDTs to detect the PfHRP antigens in Central America.
format Article in Journal/Newspaper
author Gustavo Fontecha
Alejandra Pinto
Denis Escobar
Gabriela Matamoros
Bryan Ortiz
author_facet Gustavo Fontecha
Alejandra Pinto
Denis Escobar
Gabriela Matamoros
Bryan Ortiz
author_sort Gustavo Fontecha
title Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
title_short Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
title_full Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
title_fullStr Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
title_full_unstemmed Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America
title_sort genetic variability of plasmodium falciparum histidine-rich proteins 2 and 3 in central america
publisher BMC
publishDate 2019
url https://doi.org/10.1186/s12936-019-2668-3
https://doaj.org/article/2208e4d966d043b5a6a4c1dc905959ec
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Malaria Journal, Vol 18, Iss 1, Pp 1-10 (2019)
op_relation http://link.springer.com/article/10.1186/s12936-019-2668-3
https://doaj.org/toc/1475-2875
doi:10.1186/s12936-019-2668-3
1475-2875
https://doaj.org/article/2208e4d966d043b5a6a4c1dc905959ec
op_doi https://doi.org/10.1186/s12936-019-2668-3
container_title Malaria Journal
container_volume 18
container_issue 1
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