Aquatic Insects Are Dramatically Underrepresented in Genomic Research

Aquatic insects comprise 10% of all insect diversity, can be found on every continent except Antarctica, and are key components of freshwater ecosystems. However, aquatic insect genome biology lags dramatically behind that of terrestrial insects. If genomic effort was spread evenly, one aquatic inse...

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Published in:Insects
Main Authors: Scott Hotaling, Joanna L. Kelley, Paul B. Frandsen
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2020
Subjects:
Q
Online Access:https://doi.org/10.3390/insects11090601
https://doaj.org/article/1a61f4afd65a4638a46f07f858c19418
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spelling ftdoajarticles:oai:doaj.org/article:1a61f4afd65a4638a46f07f858c19418 2023-05-15T13:52:44+02:00 Aquatic Insects Are Dramatically Underrepresented in Genomic Research Scott Hotaling Joanna L. Kelley Paul B. Frandsen 2020-09-01T00:00:00Z https://doi.org/10.3390/insects11090601 https://doaj.org/article/1a61f4afd65a4638a46f07f858c19418 EN eng MDPI AG https://www.mdpi.com/2075-4450/11/9/601 https://doaj.org/toc/2075-4450 doi:10.3390/insects11090601 2075-4450 https://doaj.org/article/1a61f4afd65a4638a46f07f858c19418 Insects, Vol 11, Iss 601, p 601 (2020) Ephemeroptera Plecoptera Trichoptera Odonata Megaloptera genome biology Science Q article 2020 ftdoajarticles https://doi.org/10.3390/insects11090601 2022-12-31T15:00:05Z Aquatic insects comprise 10% of all insect diversity, can be found on every continent except Antarctica, and are key components of freshwater ecosystems. However, aquatic insect genome biology lags dramatically behind that of terrestrial insects. If genomic effort was spread evenly, one aquatic insect genome would be sequenced for every ~9 terrestrial insect genomes. Instead, ~24 terrestrial insect genomes have been sequenced for every aquatic insect genome. This discrepancy is even more dramatic if the quality of genomic resources is considered; for instance, while no aquatic insect genome has been assembled to the chromosome level, 29 terrestrial insect genomes spanning four orders have. We argue that a lack of aquatic insect genomes is not due to any underlying difficulty (e.g., small body sizes or unusually large genomes), yet it is severely hampering aquatic insect research at both fundamental and applied scales. By expanding the availability of aquatic insect genomes, we will gain key insight into insect diversification and empower future research for a globally important taxonomic group. Article in Journal/Newspaper Antarc* Antarctica Directory of Open Access Journals: DOAJ Articles Insects 11 9 601
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ephemeroptera
Plecoptera
Trichoptera
Odonata
Megaloptera
genome biology
Science
Q
spellingShingle Ephemeroptera
Plecoptera
Trichoptera
Odonata
Megaloptera
genome biology
Science
Q
Scott Hotaling
Joanna L. Kelley
Paul B. Frandsen
Aquatic Insects Are Dramatically Underrepresented in Genomic Research
topic_facet Ephemeroptera
Plecoptera
Trichoptera
Odonata
Megaloptera
genome biology
Science
Q
description Aquatic insects comprise 10% of all insect diversity, can be found on every continent except Antarctica, and are key components of freshwater ecosystems. However, aquatic insect genome biology lags dramatically behind that of terrestrial insects. If genomic effort was spread evenly, one aquatic insect genome would be sequenced for every ~9 terrestrial insect genomes. Instead, ~24 terrestrial insect genomes have been sequenced for every aquatic insect genome. This discrepancy is even more dramatic if the quality of genomic resources is considered; for instance, while no aquatic insect genome has been assembled to the chromosome level, 29 terrestrial insect genomes spanning four orders have. We argue that a lack of aquatic insect genomes is not due to any underlying difficulty (e.g., small body sizes or unusually large genomes), yet it is severely hampering aquatic insect research at both fundamental and applied scales. By expanding the availability of aquatic insect genomes, we will gain key insight into insect diversification and empower future research for a globally important taxonomic group.
format Article in Journal/Newspaper
author Scott Hotaling
Joanna L. Kelley
Paul B. Frandsen
author_facet Scott Hotaling
Joanna L. Kelley
Paul B. Frandsen
author_sort Scott Hotaling
title Aquatic Insects Are Dramatically Underrepresented in Genomic Research
title_short Aquatic Insects Are Dramatically Underrepresented in Genomic Research
title_full Aquatic Insects Are Dramatically Underrepresented in Genomic Research
title_fullStr Aquatic Insects Are Dramatically Underrepresented in Genomic Research
title_full_unstemmed Aquatic Insects Are Dramatically Underrepresented in Genomic Research
title_sort aquatic insects are dramatically underrepresented in genomic research
publisher MDPI AG
publishDate 2020
url https://doi.org/10.3390/insects11090601
https://doaj.org/article/1a61f4afd65a4638a46f07f858c19418
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_source Insects, Vol 11, Iss 601, p 601 (2020)
op_relation https://www.mdpi.com/2075-4450/11/9/601
https://doaj.org/toc/2075-4450
doi:10.3390/insects11090601
2075-4450
https://doaj.org/article/1a61f4afd65a4638a46f07f858c19418
op_doi https://doi.org/10.3390/insects11090601
container_title Insects
container_volume 11
container_issue 9
container_start_page 601
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