Microbial communities in a High Arctic polar desert landscape

The High Arctic is dominated by polar desert habitats whose microbial communities are poorly understood. In this study, we used next generation sequencing to describe the α- and β-diversity of polar desert soils from the Kongsfjorden region of Svalbard. Ten phyla consistently dominated the soils and...

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Published in:Frontiers in Microbiology
Main Authors: Clare M McCann, Matthew eWade, Neil D Gray, Jennifer A Roberts, Casey RJ Hubert, David W eGraham
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2016
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2016.00419
https://doaj.org/article/1571196a1cb742e086d8990e8790e346
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spelling ftdoajarticles:oai:doaj.org/article:1571196a1cb742e086d8990e8790e346 2023-05-15T14:50:55+02:00 Microbial communities in a High Arctic polar desert landscape Clare M McCann Matthew eWade Neil D Gray Jennifer A Roberts Casey RJ Hubert David W eGraham 2016-03-01T00:00:00Z https://doi.org/10.3389/fmicb.2016.00419 https://doaj.org/article/1571196a1cb742e086d8990e8790e346 EN eng Frontiers Media S.A. http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00419/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2016.00419 https://doaj.org/article/1571196a1cb742e086d8990e8790e346 Frontiers in Microbiology, Vol 7 (2016) Ecology Phosphorus biogeochemistry Microbial Diversity polar soils Microbiology QR1-502 article 2016 ftdoajarticles https://doi.org/10.3389/fmicb.2016.00419 2022-12-31T15:59:04Z The High Arctic is dominated by polar desert habitats whose microbial communities are poorly understood. In this study, we used next generation sequencing to describe the α- and β-diversity of polar desert soils from the Kongsfjorden region of Svalbard. Ten phyla consistently dominated the soils and accounted for 95 % of all sequences, with Proteobacteria, Actinobacteria and Chloroflexi being the dominant lineages. In contrast to previous investigations of Arctic soils, Acidobacterial relative abundances were low as were the Archaea throughout the Kongsfjorden polar desert landscape. Lower Acidobacterial abundances were attributed to the circumneutral soil pH in this region which has resulted from the weathering of the underlying carbonate geology. In addition, we correlated previously measured geochemical variables to determine potential controls on the communities. Soil phosphorus, pH, nitrogen and calcium significantly correlated with β-diversity indicating a landscape scale lithological control of soil nutrients which in turn influenced community composition. In addition, soil phosphorus and pH significantly correlated with α- diversity, specifically the Shannon diversity and Chao 1 richness indices. Article in Journal/Newspaper Arctic Kongsfjord* Kongsfjorden polar desert Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Frontiers in Microbiology 7
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ecology
Phosphorus
biogeochemistry
Microbial Diversity
polar soils
Microbiology
QR1-502
spellingShingle Ecology
Phosphorus
biogeochemistry
Microbial Diversity
polar soils
Microbiology
QR1-502
Clare M McCann
Matthew eWade
Neil D Gray
Jennifer A Roberts
Casey RJ Hubert
David W eGraham
Microbial communities in a High Arctic polar desert landscape
topic_facet Ecology
Phosphorus
biogeochemistry
Microbial Diversity
polar soils
Microbiology
QR1-502
description The High Arctic is dominated by polar desert habitats whose microbial communities are poorly understood. In this study, we used next generation sequencing to describe the α- and β-diversity of polar desert soils from the Kongsfjorden region of Svalbard. Ten phyla consistently dominated the soils and accounted for 95 % of all sequences, with Proteobacteria, Actinobacteria and Chloroflexi being the dominant lineages. In contrast to previous investigations of Arctic soils, Acidobacterial relative abundances were low as were the Archaea throughout the Kongsfjorden polar desert landscape. Lower Acidobacterial abundances were attributed to the circumneutral soil pH in this region which has resulted from the weathering of the underlying carbonate geology. In addition, we correlated previously measured geochemical variables to determine potential controls on the communities. Soil phosphorus, pH, nitrogen and calcium significantly correlated with β-diversity indicating a landscape scale lithological control of soil nutrients which in turn influenced community composition. In addition, soil phosphorus and pH significantly correlated with α- diversity, specifically the Shannon diversity and Chao 1 richness indices.
format Article in Journal/Newspaper
author Clare M McCann
Matthew eWade
Neil D Gray
Jennifer A Roberts
Casey RJ Hubert
David W eGraham
author_facet Clare M McCann
Matthew eWade
Neil D Gray
Jennifer A Roberts
Casey RJ Hubert
David W eGraham
author_sort Clare M McCann
title Microbial communities in a High Arctic polar desert landscape
title_short Microbial communities in a High Arctic polar desert landscape
title_full Microbial communities in a High Arctic polar desert landscape
title_fullStr Microbial communities in a High Arctic polar desert landscape
title_full_unstemmed Microbial communities in a High Arctic polar desert landscape
title_sort microbial communities in a high arctic polar desert landscape
publisher Frontiers Media S.A.
publishDate 2016
url https://doi.org/10.3389/fmicb.2016.00419
https://doaj.org/article/1571196a1cb742e086d8990e8790e346
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Kongsfjord*
Kongsfjorden
polar desert
Svalbard
genre_facet Arctic
Kongsfjord*
Kongsfjorden
polar desert
Svalbard
op_source Frontiers in Microbiology, Vol 7 (2016)
op_relation http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00419/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2016.00419
https://doaj.org/article/1571196a1cb742e086d8990e8790e346
op_doi https://doi.org/10.3389/fmicb.2016.00419
container_title Frontiers in Microbiology
container_volume 7
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