Forecasting mussel settlement using historical data and boosted regression trees

Many aquaculture sectors internationally, most notably for the cultivation of bivalves, rely almost completely on wild-caught juveniles (‘spat’) to stock farms, with poor ‘catches’ representing one the biggest constraints on global production. An example of this practice is green-lipped mussel Perna...

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Published in:Aquaculture Environment Interactions
Main Authors: Atalah, J, Forrest, BM
Format: Article in Journal/Newspaper
Language:English
Published: Inter-Research 2019
Subjects:
Online Access:https://doi.org/10.3354/aei00337
https://doaj.org/article/13ebc91676e648408b0349adb2b9863e
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spelling ftdoajarticles:oai:doaj.org/article:13ebc91676e648408b0349adb2b9863e 2023-05-15T18:25:43+02:00 Forecasting mussel settlement using historical data and boosted regression trees Atalah, J Forrest, BM 2019-12-01T00:00:00Z https://doi.org/10.3354/aei00337 https://doaj.org/article/13ebc91676e648408b0349adb2b9863e EN eng Inter-Research https://www.int-res.com/abstracts/aei/v11/p625-638/ https://doaj.org/toc/1869-215X https://doaj.org/toc/1869-7534 1869-215X 1869-7534 doi:10.3354/aei00337 https://doaj.org/article/13ebc91676e648408b0349adb2b9863e Aquaculture Environment Interactions, Vol 11, Pp 625-638 (2019) Aquaculture. Fisheries. Angling SH1-691 Ecology QH540-549.5 article 2019 ftdoajarticles https://doi.org/10.3354/aei00337 2022-12-30T23:10:51Z Many aquaculture sectors internationally, most notably for the cultivation of bivalves, rely almost completely on wild-caught juveniles (‘spat’) to stock farms, with poor ‘catches’ representing one the biggest constraints on global production. An example of this practice is green-lipped mussel Perna canaliculus aquaculture in New Zealand, where the industry in the main growing region has been monitoring P. canaliculus settlement for almost 40 yr. This practice involves deploying settlement arrays across the region to guide the places and times to place spat-catching rope. Using a subset of these data spanning 25 yr (1993-2018), we identified regional spatio-temporal patterns of P. canaliculus spat settlement. Boosted regression tree (BRT) models were used to forecast settlement at 2 different sub-regions with consistent high catch yields. BRT models confirmed a strong seasonal influence on settlement, with highest predicted settlement levels coinciding with the main P. canaliculus spawning period (late summer to autumn). Positive relationships were detected between settlement and the occurrence of positive temperature anomalies, easterly winds, periods of large tidal range and Southern Ocean Oscillation Index values associated with La Niña episodes. The models were able to forecast P. canaliculus settlement with excellent prediction accuracy based on time of year and environmental conditions 1 mo prior to collection. This study highlights the benefit of undertaking long-term monitoring of spat settlement and the related environmental factors that affect this ecological process. In combination with advance modelling techniques that enable forecasting of settlement densities, such knowledge can help to overcome challenges in spat supply and enable production upscaling. Article in Journal/Newspaper Southern Ocean Directory of Open Access Journals: DOAJ Articles Southern Ocean New Zealand Aquaculture Environment Interactions 11 625 638
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Aquaculture. Fisheries. Angling
SH1-691
Ecology
QH540-549.5
spellingShingle Aquaculture. Fisheries. Angling
SH1-691
Ecology
QH540-549.5
Atalah, J
Forrest, BM
Forecasting mussel settlement using historical data and boosted regression trees
topic_facet Aquaculture. Fisheries. Angling
SH1-691
Ecology
QH540-549.5
description Many aquaculture sectors internationally, most notably for the cultivation of bivalves, rely almost completely on wild-caught juveniles (‘spat’) to stock farms, with poor ‘catches’ representing one the biggest constraints on global production. An example of this practice is green-lipped mussel Perna canaliculus aquaculture in New Zealand, where the industry in the main growing region has been monitoring P. canaliculus settlement for almost 40 yr. This practice involves deploying settlement arrays across the region to guide the places and times to place spat-catching rope. Using a subset of these data spanning 25 yr (1993-2018), we identified regional spatio-temporal patterns of P. canaliculus spat settlement. Boosted regression tree (BRT) models were used to forecast settlement at 2 different sub-regions with consistent high catch yields. BRT models confirmed a strong seasonal influence on settlement, with highest predicted settlement levels coinciding with the main P. canaliculus spawning period (late summer to autumn). Positive relationships were detected between settlement and the occurrence of positive temperature anomalies, easterly winds, periods of large tidal range and Southern Ocean Oscillation Index values associated with La Niña episodes. The models were able to forecast P. canaliculus settlement with excellent prediction accuracy based on time of year and environmental conditions 1 mo prior to collection. This study highlights the benefit of undertaking long-term monitoring of spat settlement and the related environmental factors that affect this ecological process. In combination with advance modelling techniques that enable forecasting of settlement densities, such knowledge can help to overcome challenges in spat supply and enable production upscaling.
format Article in Journal/Newspaper
author Atalah, J
Forrest, BM
author_facet Atalah, J
Forrest, BM
author_sort Atalah, J
title Forecasting mussel settlement using historical data and boosted regression trees
title_short Forecasting mussel settlement using historical data and boosted regression trees
title_full Forecasting mussel settlement using historical data and boosted regression trees
title_fullStr Forecasting mussel settlement using historical data and boosted regression trees
title_full_unstemmed Forecasting mussel settlement using historical data and boosted regression trees
title_sort forecasting mussel settlement using historical data and boosted regression trees
publisher Inter-Research
publishDate 2019
url https://doi.org/10.3354/aei00337
https://doaj.org/article/13ebc91676e648408b0349adb2b9863e
geographic Southern Ocean
New Zealand
geographic_facet Southern Ocean
New Zealand
genre Southern Ocean
genre_facet Southern Ocean
op_source Aquaculture Environment Interactions, Vol 11, Pp 625-638 (2019)
op_relation https://www.int-res.com/abstracts/aei/v11/p625-638/
https://doaj.org/toc/1869-215X
https://doaj.org/toc/1869-7534
1869-215X
1869-7534
doi:10.3354/aei00337
https://doaj.org/article/13ebc91676e648408b0349adb2b9863e
op_doi https://doi.org/10.3354/aei00337
container_title Aquaculture Environment Interactions
container_volume 11
container_start_page 625
op_container_end_page 638
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