Phylogeography, salinity adaptations and metabolic potential of the Candidate Division KB1 Bacteria based on a partial single cell genome.

• Published in: Frontiers in Microbiology
• Main Authors: Lisa M Nigro, Andrew S Hyde, Barbara J. MacGregor, Andreas Teske
• Format: Article in Journal/Newspaper
• Language: English
• Published: Frontiers Media S.A. 2016
• Subjects: Genome; Phylogeography; hypersaline; Orca Basin; Candidate Division KB1; Microbiology; QR1-502; Orca
• Online Access: https://doi.org/10.3389/fmicb.2016.01266; https://doaj.org/article/10c18617547549e9963c0d3336514a4a

Deep-sea hypersaline anoxic basins (DHABs) and other hypersaline environments contain abundant and diverse microbial life that has adapted to these extreme conditions. The bacterial Candidate Division KB1 represents one of several uncultured groups that has been consistently observed in hypersaline microbial diversity studies. Here we report the phylogeography of KB1, its phylogenetic relationships to Candidate Division OP1 Bacteria, and its potential metabolic and osmotic stress adaptations based on a partial single cell amplified genome (SAG) of KB1 from Orca Basin, the largest hypersaline seafloor brine basin in the Gulf of Mexico. Our results are consistent with the hypothesis – previously developed based on 14C incorporation experiments with mixed-species enrichments from Mediterranean seafloor brines - that KB1 has adapted its proteins to elevated intracellular salinity, but at the same time KB1 apparently imports glycine betaine; this compatible solute is potentially not limited to osmoregulation but could also serve as a carbon and energy source.