Filtering out false Sargassum detections using context features

Since 2011, the distribution extent of pelagic Sargassum algae has substantially increased and now covers the whole Tropical North Atlantic Ocean, with significant inter-annual variability. The ocean colour imagery has been used as the only way to monitor regularly such a vast area. However, the det...

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Published in:Frontiers in Marine Science
Main Authors: Witold Podlejski, Jacques Descloitres, Cristèle Chevalier, Audrey Minghelli, Christophe Lett, Léo Berline
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2022
Subjects:
Q
Online Access:https://doi.org/10.3389/fmars.2022.960939
https://doaj.org/article/10ae2aebcdf34621a02122aa430dc7c5
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spelling ftdoajarticles:oai:doaj.org/article:10ae2aebcdf34621a02122aa430dc7c5 2023-05-15T17:32:08+02:00 Filtering out false Sargassum detections using context features Witold Podlejski Jacques Descloitres Cristèle Chevalier Audrey Minghelli Christophe Lett Léo Berline 2022-09-01T00:00:00Z https://doi.org/10.3389/fmars.2022.960939 https://doaj.org/article/10ae2aebcdf34621a02122aa430dc7c5 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmars.2022.960939/full https://doaj.org/toc/2296-7745 2296-7745 doi:10.3389/fmars.2022.960939 https://doaj.org/article/10ae2aebcdf34621a02122aa430dc7c5 Frontiers in Marine Science, Vol 9 (2022) Sargassum algae remote sensing random forest contextual analysis Tropical North Atlantic fractional coverage Science Q General. Including nature conservation geographical distribution QH1-199.5 article 2022 ftdoajarticles https://doi.org/10.3389/fmars.2022.960939 2022-12-30T21:57:41Z Since 2011, the distribution extent of pelagic Sargassum algae has substantially increased and now covers the whole Tropical North Atlantic Ocean, with significant inter-annual variability. The ocean colour imagery has been used as the only way to monitor regularly such a vast area. However, the detection is hampered by cloud masking, sunglint, coastal contamination and other phenomena. All together, they lead to false detections that can hardly be discriminated by classic radiometric analysis, but may be overcome by considering the shape and the context of the detections. Here, we built a machine learning model base exclusively on spatial features to filter out false detections after the detection process. Moderate-Resolution Imaging Spectroradiometer (MODIS, 1 km) data from Aqua and Terra satellites were used to generate daily map of Alternative Floating Algae Index (AFAI). Based on this radiometric index, Sargassum presence in the Tropical Atlantic North Ocean was inferred. For every Sargassum aggregations, five contextual indices were extracted (number of neighbours, surface of neighbours, temporal persistence, distance to the coast and aggregation texture) then used by a random forest binary classifier. Contextual features at large-scale were most important in the classifier. Trained with a multi-annual (2016-2020) learning set, the model performs the filtering of daily false detections with an accuracy of ~ 90%. This leads to a reduction of detected Sargassum pixels of ~ 50% over the domain. The method provides reliable data while preserving high spatial and temporal resolutions (1 km, daily). The resulting distribution is consistent with the literature for seasonal and inter-annual fluctuations, with maximum coverage in 2018 and minimum in 2016. This dataset will be useful for understanding the drivers of Sargassum dynamics at fine and large scale and validate future models. The methodology used here demonstrates the usefulness of contextual features for complementing classical remote sensing approaches. ... Article in Journal/Newspaper North Atlantic Directory of Open Access Journals: DOAJ Articles Frontiers in Marine Science 9
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Sargassum algae
remote sensing
random forest
contextual analysis
Tropical North Atlantic
fractional coverage
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
spellingShingle Sargassum algae
remote sensing
random forest
contextual analysis
Tropical North Atlantic
fractional coverage
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
Witold Podlejski
Jacques Descloitres
Cristèle Chevalier
Audrey Minghelli
Christophe Lett
Léo Berline
Filtering out false Sargassum detections using context features
topic_facet Sargassum algae
remote sensing
random forest
contextual analysis
Tropical North Atlantic
fractional coverage
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
description Since 2011, the distribution extent of pelagic Sargassum algae has substantially increased and now covers the whole Tropical North Atlantic Ocean, with significant inter-annual variability. The ocean colour imagery has been used as the only way to monitor regularly such a vast area. However, the detection is hampered by cloud masking, sunglint, coastal contamination and other phenomena. All together, they lead to false detections that can hardly be discriminated by classic radiometric analysis, but may be overcome by considering the shape and the context of the detections. Here, we built a machine learning model base exclusively on spatial features to filter out false detections after the detection process. Moderate-Resolution Imaging Spectroradiometer (MODIS, 1 km) data from Aqua and Terra satellites were used to generate daily map of Alternative Floating Algae Index (AFAI). Based on this radiometric index, Sargassum presence in the Tropical Atlantic North Ocean was inferred. For every Sargassum aggregations, five contextual indices were extracted (number of neighbours, surface of neighbours, temporal persistence, distance to the coast and aggregation texture) then used by a random forest binary classifier. Contextual features at large-scale were most important in the classifier. Trained with a multi-annual (2016-2020) learning set, the model performs the filtering of daily false detections with an accuracy of ~ 90%. This leads to a reduction of detected Sargassum pixels of ~ 50% over the domain. The method provides reliable data while preserving high spatial and temporal resolutions (1 km, daily). The resulting distribution is consistent with the literature for seasonal and inter-annual fluctuations, with maximum coverage in 2018 and minimum in 2016. This dataset will be useful for understanding the drivers of Sargassum dynamics at fine and large scale and validate future models. The methodology used here demonstrates the usefulness of contextual features for complementing classical remote sensing approaches. ...
format Article in Journal/Newspaper
author Witold Podlejski
Jacques Descloitres
Cristèle Chevalier
Audrey Minghelli
Christophe Lett
Léo Berline
author_facet Witold Podlejski
Jacques Descloitres
Cristèle Chevalier
Audrey Minghelli
Christophe Lett
Léo Berline
author_sort Witold Podlejski
title Filtering out false Sargassum detections using context features
title_short Filtering out false Sargassum detections using context features
title_full Filtering out false Sargassum detections using context features
title_fullStr Filtering out false Sargassum detections using context features
title_full_unstemmed Filtering out false Sargassum detections using context features
title_sort filtering out false sargassum detections using context features
publisher Frontiers Media S.A.
publishDate 2022
url https://doi.org/10.3389/fmars.2022.960939
https://doaj.org/article/10ae2aebcdf34621a02122aa430dc7c5
genre North Atlantic
genre_facet North Atlantic
op_source Frontiers in Marine Science, Vol 9 (2022)
op_relation https://www.frontiersin.org/articles/10.3389/fmars.2022.960939/full
https://doaj.org/toc/2296-7745
2296-7745
doi:10.3389/fmars.2022.960939
https://doaj.org/article/10ae2aebcdf34621a02122aa430dc7c5
op_doi https://doi.org/10.3389/fmars.2022.960939
container_title Frontiers in Marine Science
container_volume 9
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