Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.

Lake Vostok, the 7(th) largest (by volume) and 4(th) deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete...

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Published in:PLoS ONE
Main Authors: Yury M Shtarkman, Zeynep A Koçer, Robyn Edgar, Ram S Veerapaneni, Tom D'Elia, Paul F Morris, Scott O Rogers
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2013
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0067221
https://doaj.org/article/00b4e0ce474f43768dd2d1df6adf8f30
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spelling ftdoajarticles:oai:doaj.org/article:00b4e0ce474f43768dd2d1df6adf8f30 2023-05-15T13:55:29+02:00 Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya. Yury M Shtarkman Zeynep A Koçer Robyn Edgar Ram S Veerapaneni Tom D'Elia Paul F Morris Scott O Rogers 2013-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0067221 https://doaj.org/article/00b4e0ce474f43768dd2d1df6adf8f30 EN eng Public Library of Science (PLoS) https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23843994/?tool=EBI https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0067221 https://doaj.org/article/00b4e0ce474f43768dd2d1df6adf8f30 PLoS ONE, Vol 8, Iss 7, p e67221 (2013) Medicine R Science Q article 2013 ftdoajarticles https://doi.org/10.1371/journal.pone.0067221 2022-12-31T07:25:27Z Lake Vostok, the 7(th) largest (by volume) and 4(th) deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete darkness presents extreme challenges to life. Here, we report metagenomic/metatranscriptomic sequence analyses from four accretion ice sections from the Vostok 5G ice core. Two sections accreted in the vicinity of an embayment on the southwestern end of the lake, and the other two represented part of the southern main basin. We obtained 3,507 unique gene sequences from concentrates of 500 ml of 0.22 µm-filtered accretion ice meltwater. Taxonomic classifications (to genus and/or species) were possible for 1,623 of the sequences. Species determinations in combination with mRNA gene sequence results allowed deduction of the metabolic pathways represented in the accretion ice and, by extension, in the lake. Approximately 94% of the sequences were from Bacteria and 6% were from Eukarya. Only two sequences were from Archaea. In general, the taxa were similar to organisms previously described from lakes, brackish water, marine environments, soil, glaciers, ice, lake sediments, deep-sea sediments, deep-sea thermal vents, animals and plants. Sequences from aerobic, anaerobic, psychrophilic, thermophilic, halophilic, alkaliphilic, acidophilic, desiccation-resistant, autotrophic and heterotrophic organisms were present, including a number from multicellular eukaryotes. Article in Journal/Newspaper Antarc* Antarctica ice core Directory of Open Access Journals: DOAJ Articles Lake Vostok ENVELOPE(106.000,106.000,-77.500,-77.500) PLoS ONE 8 7 e67221
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Yury M Shtarkman
Zeynep A Koçer
Robyn Edgar
Ram S Veerapaneni
Tom D'Elia
Paul F Morris
Scott O Rogers
Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
topic_facet Medicine
R
Science
Q
description Lake Vostok, the 7(th) largest (by volume) and 4(th) deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete darkness presents extreme challenges to life. Here, we report metagenomic/metatranscriptomic sequence analyses from four accretion ice sections from the Vostok 5G ice core. Two sections accreted in the vicinity of an embayment on the southwestern end of the lake, and the other two represented part of the southern main basin. We obtained 3,507 unique gene sequences from concentrates of 500 ml of 0.22 µm-filtered accretion ice meltwater. Taxonomic classifications (to genus and/or species) were possible for 1,623 of the sequences. Species determinations in combination with mRNA gene sequence results allowed deduction of the metabolic pathways represented in the accretion ice and, by extension, in the lake. Approximately 94% of the sequences were from Bacteria and 6% were from Eukarya. Only two sequences were from Archaea. In general, the taxa were similar to organisms previously described from lakes, brackish water, marine environments, soil, glaciers, ice, lake sediments, deep-sea sediments, deep-sea thermal vents, animals and plants. Sequences from aerobic, anaerobic, psychrophilic, thermophilic, halophilic, alkaliphilic, acidophilic, desiccation-resistant, autotrophic and heterotrophic organisms were present, including a number from multicellular eukaryotes.
format Article in Journal/Newspaper
author Yury M Shtarkman
Zeynep A Koçer
Robyn Edgar
Ram S Veerapaneni
Tom D'Elia
Paul F Morris
Scott O Rogers
author_facet Yury M Shtarkman
Zeynep A Koçer
Robyn Edgar
Ram S Veerapaneni
Tom D'Elia
Paul F Morris
Scott O Rogers
author_sort Yury M Shtarkman
title Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
title_short Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
title_full Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
title_fullStr Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
title_full_unstemmed Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
title_sort subglacial lake vostok (antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya.
publisher Public Library of Science (PLoS)
publishDate 2013
url https://doi.org/10.1371/journal.pone.0067221
https://doaj.org/article/00b4e0ce474f43768dd2d1df6adf8f30
long_lat ENVELOPE(106.000,106.000,-77.500,-77.500)
geographic Lake Vostok
geographic_facet Lake Vostok
genre Antarc*
Antarctica
ice core
genre_facet Antarc*
Antarctica
ice core
op_source PLoS ONE, Vol 8, Iss 7, p e67221 (2013)
op_relation https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23843994/?tool=EBI
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0067221
https://doaj.org/article/00b4e0ce474f43768dd2d1df6adf8f30
op_doi https://doi.org/10.1371/journal.pone.0067221
container_title PLoS ONE
container_volume 8
container_issue 7
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