Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cy...
Main Authors: | , , |
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Other Authors: | |
Format: | Other/Unknown Material |
Language: | English |
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DataverseNO
2018
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Online Access: | https://doi.org/10.18710/VITGV3 |
_version_ | 1821677940758282240 |
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author | Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
author2 | Eikås, Karolina Solheimslid |
author_facet | Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
author_sort | Eikås, Karolina Di Remigio |
collection | DataverseNO |
description | This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see "Download via URL" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url |
format | Other/Unknown Material |
genre | Orca |
genre_facet | Orca |
geographic | Bala |
geographic_facet | Bala |
id | ftdataverseno:doi:10.18710/VITGV3 |
institution | Open Polar |
language | English |
long_lat | ENVELOPE(132.817,132.817,67.178,67.178) |
op_collection_id | ftdataverseno |
op_doi | https://doi.org/10.18710/VITGV3 |
op_relation | https://doi.org/10.18710/VITGV3 |
publishDate | 2018 |
publisher | DataverseNO |
record_format | openpolar |
spelling | ftdataverseno:doi:10.18710/VITGV3 2025-01-17T00:10:15+00:00 Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. Eikås, Karolina Solheimslid 2018-06-01 https://doi.org/10.18710/VITGV3 English eng DataverseNO https://doi.org/10.18710/VITGV3 Chemistry Cyclic Peptides Vibrational Circular Dichroism Conformational search Chiroptical Spectroscopy program source code, process-produced data 2018 ftdataverseno https://doi.org/10.18710/VITGV3 2024-09-24T14:11:59Z This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see "Download via URL" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url Other/Unknown Material Orca DataverseNO Bala ENVELOPE(132.817,132.817,67.178,67.178) |
spellingShingle | Chemistry Cyclic Peptides Vibrational Circular Dichroism Conformational search Chiroptical Spectroscopy Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title | Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_full | Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_fullStr | Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_full_unstemmed | Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_short | Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_sort | replication data for: a computational protocol for vcd spectra of cyclic peptides |
topic | Chemistry Cyclic Peptides Vibrational Circular Dichroism Conformational search Chiroptical Spectroscopy |
topic_facet | Chemistry Cyclic Peptides Vibrational Circular Dichroism Conformational search Chiroptical Spectroscopy |
url | https://doi.org/10.18710/VITGV3 |