Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
Background: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze...
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ftdatacite:10.7892/boris.44154 2023-05-15T13:59:40+02:00 Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) Schwarzer, Julia Leese, Florian Raupach, Michael J. Dambach, Johannes Mayer, Christoph 2013 application/pdf https://dx.doi.org/10.7892/boris.44154 http://boris.unibe.ch/44154/ en eng Biomed Central info:eu-repo/semantics/openAccess 570 Life sciences; biology 590 Animals Zoology CreativeWork article 2013 ftdatacite https://doi.org/10.7892/boris.44154 2021-11-05T12:55:41Z Background: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. Findings: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. Conclusions: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. Article in Journal/Newspaper Antarc* Antarctic Antarctica Southern Ocean DataCite Metadata Store (German National Library of Science and Technology) Antarctic Southern Ocean The Antarctic |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
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language |
English |
topic |
570 Life sciences; biology 590 Animals Zoology |
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570 Life sciences; biology 590 Animals Zoology Schwarzer, Julia Leese, Florian Raupach, Michael J. Dambach, Johannes Mayer, Christoph Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
topic_facet |
570 Life sciences; biology 590 Animals Zoology |
description |
Background: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. Findings: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. Conclusions: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. |
format |
Article in Journal/Newspaper |
author |
Schwarzer, Julia Leese, Florian Raupach, Michael J. Dambach, Johannes Mayer, Christoph |
author_facet |
Schwarzer, Julia Leese, Florian Raupach, Michael J. Dambach, Johannes Mayer, Christoph |
author_sort |
Schwarzer, Julia |
title |
Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_short |
Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full |
Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_fullStr |
Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full_unstemmed |
Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_sort |
isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp nematocarcinus lanceopes (crustacea: decapoda: caridea) |
publisher |
Biomed Central |
publishDate |
2013 |
url |
https://dx.doi.org/10.7892/boris.44154 http://boris.unibe.ch/44154/ |
geographic |
Antarctic Southern Ocean The Antarctic |
geographic_facet |
Antarctic Southern Ocean The Antarctic |
genre |
Antarc* Antarctic Antarctica Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica Southern Ocean |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.7892/boris.44154 |
_version_ |
1766268333054754816 |