Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...

Abstract Background Plankton seascape genomics studies have revealed different trends from large-scale weak differentiation to microscale structures. Previous studies have underlined the influence of the environment and seascape on species differentiation and adaptation. However, these studies have...

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Main Authors: Laso-Jadart, Romuald, O’Malley, Michael, Sykulski, Adam M., Ambroise, Christophe, Madoui, Mohammed-Amin
Format: Article in Journal/Newspaper
Language:unknown
Published: figshare 2023
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.6817415.v1
https://springernature.figshare.com/collections/Holistic_view_of_the_seascape_dynamics_and_environment_impact_on_macro-scale_genetic_connectivity_of_marine_plankton_populations/6817415/1
id ftdatacite:10.6084/m9.figshare.c.6817415.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.c.6817415.v1 2024-04-28T08:39:32+00:00 Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ... Laso-Jadart, Romuald O’Malley, Michael Sykulski, Adam M. Ambroise, Christophe Madoui, Mohammed-Amin 2023 https://dx.doi.org/10.6084/m9.figshare.c.6817415.v1 https://springernature.figshare.com/collections/Holistic_view_of_the_seascape_dynamics_and_environment_impact_on_macro-scale_genetic_connectivity_of_marine_plankton_populations/6817415/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.c.6817415 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Genetics FOS Biological sciences Oceanography FOS Earth and related environmental sciences Collection article 2023 ftdatacite https://doi.org/10.6084/m9.figshare.c.6817415.v110.6084/m9.figshare.c.6817415 2024-04-02T12:08:15Z Abstract Background Plankton seascape genomics studies have revealed different trends from large-scale weak differentiation to microscale structures. Previous studies have underlined the influence of the environment and seascape on species differentiation and adaptation. However, these studies have generally focused on a few single species, sparse molecular markers, or local scales. Here, we investigated the genomic differentiation of plankton at the macro-scale in a holistic approach using Tara Oceans metagenomic data together with a reference-free computational method. Results We reconstructed the FST-based genomic differentiation of 113 marine planktonic taxa occurring in the North and South Atlantic Oceans, Southern Ocean, and Mediterranean Sea. These taxa belong to various taxonomic clades spanning Metazoa, Chromista, Chlorophyta, Bacteria, and viruses. Globally, population genetic connectivity was significantly higher within oceanic basins and lower in bacteria and unicellular eukaryotes than in ... Article in Journal/Newspaper Southern Ocean DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Genetics
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
spellingShingle Genetics
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
Laso-Jadart, Romuald
O’Malley, Michael
Sykulski, Adam M.
Ambroise, Christophe
Madoui, Mohammed-Amin
Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
topic_facet Genetics
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
description Abstract Background Plankton seascape genomics studies have revealed different trends from large-scale weak differentiation to microscale structures. Previous studies have underlined the influence of the environment and seascape on species differentiation and adaptation. However, these studies have generally focused on a few single species, sparse molecular markers, or local scales. Here, we investigated the genomic differentiation of plankton at the macro-scale in a holistic approach using Tara Oceans metagenomic data together with a reference-free computational method. Results We reconstructed the FST-based genomic differentiation of 113 marine planktonic taxa occurring in the North and South Atlantic Oceans, Southern Ocean, and Mediterranean Sea. These taxa belong to various taxonomic clades spanning Metazoa, Chromista, Chlorophyta, Bacteria, and viruses. Globally, population genetic connectivity was significantly higher within oceanic basins and lower in bacteria and unicellular eukaryotes than in ...
format Article in Journal/Newspaper
author Laso-Jadart, Romuald
O’Malley, Michael
Sykulski, Adam M.
Ambroise, Christophe
Madoui, Mohammed-Amin
author_facet Laso-Jadart, Romuald
O’Malley, Michael
Sykulski, Adam M.
Ambroise, Christophe
Madoui, Mohammed-Amin
author_sort Laso-Jadart, Romuald
title Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
title_short Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
title_full Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
title_fullStr Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
title_full_unstemmed Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
title_sort holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations ...
publisher figshare
publishDate 2023
url https://dx.doi.org/10.6084/m9.figshare.c.6817415.v1
https://springernature.figshare.com/collections/Holistic_view_of_the_seascape_dynamics_and_environment_impact_on_macro-scale_genetic_connectivity_of_marine_plankton_populations/6817415/1
genre Southern Ocean
genre_facet Southern Ocean
op_relation https://dx.doi.org/10.6084/m9.figshare.c.6817415
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.6084/m9.figshare.c.6817415.v110.6084/m9.figshare.c.6817415
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