Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis
Abstract Arthrobacter alpinus R3.8 is a psychrotolerant bacterial strain isolated from a soil sample obtained at Rothera Point, Adelaide Island, close to the Antarctic Peninsula. Strain R3.8 was sequenced in order to help discover potential cold active enzymes with biotechnological applications. Gen...
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ftdatacite:10.6084/m9.figshare.c.3871957 2023-05-15T13:03:52+02:00 Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis Wah-Seng See-Too Robson Ee Yan-Lue Lim Convey, Peter Pearce, David Taznim Mohidin Yin, Wai-Fong Chan, Kok 2017 https://dx.doi.org/10.6084/m9.figshare.c.3871957 https://springernature.figshare.com/collections/Complete_genome_of_Arthrobacter_alpinus_strain_R3_8_bioremediation_potential_unraveled_with_genomic_analysis/3871957 unknown Figshare https://dx.doi.org/10.1186/s40793-017-0264-0 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Biophysics Microbiology FOS Biological sciences Genetics Biotechnology Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Hematology Infectious Diseases FOS Health sciences Virology Collection article 2017 ftdatacite https://doi.org/10.6084/m9.figshare.c.3871957 https://doi.org/10.1186/s40793-017-0264-0 2021-11-05T12:55:41Z Abstract Arthrobacter alpinus R3.8 is a psychrotolerant bacterial strain isolated from a soil sample obtained at Rothera Point, Adelaide Island, close to the Antarctic Peninsula. Strain R3.8 was sequenced in order to help discover potential cold active enzymes with biotechnological applications. Genome analysis identified various cold adaptation genes including some coding for anti-freeze proteins and cold-shock proteins, genes involved in bioremediation of xenobiotic compounds including naphthalene, and genes with chitinolytic and N-acetylglucosamine utilization properties and also plant-growth-influencing properties. In this genome report, we present a complete genome sequence of A. alpinus strain R3.8 and its annotation data, which will facilitate exploitation of potential novel cold-active enzymes. Article in Journal/Newspaper Adelaide Island Antarc* Antarctic Antarctic Peninsula DataCite Metadata Store (German National Library of Science and Technology) Adelaide Island ENVELOPE(-68.914,-68.914,-67.762,-67.762) Antarctic Antarctic Peninsula Rothera ENVELOPE(-68.130,-68.130,-67.568,-67.568) Rothera Point ENVELOPE(-68.133,-68.133,-67.567,-67.567) The Antarctic |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Biophysics Microbiology FOS Biological sciences Genetics Biotechnology Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Hematology Infectious Diseases FOS Health sciences Virology |
spellingShingle |
Biophysics Microbiology FOS Biological sciences Genetics Biotechnology Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Hematology Infectious Diseases FOS Health sciences Virology Wah-Seng See-Too Robson Ee Yan-Lue Lim Convey, Peter Pearce, David Taznim Mohidin Yin, Wai-Fong Chan, Kok Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
topic_facet |
Biophysics Microbiology FOS Biological sciences Genetics Biotechnology Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Hematology Infectious Diseases FOS Health sciences Virology |
description |
Abstract Arthrobacter alpinus R3.8 is a psychrotolerant bacterial strain isolated from a soil sample obtained at Rothera Point, Adelaide Island, close to the Antarctic Peninsula. Strain R3.8 was sequenced in order to help discover potential cold active enzymes with biotechnological applications. Genome analysis identified various cold adaptation genes including some coding for anti-freeze proteins and cold-shock proteins, genes involved in bioremediation of xenobiotic compounds including naphthalene, and genes with chitinolytic and N-acetylglucosamine utilization properties and also plant-growth-influencing properties. In this genome report, we present a complete genome sequence of A. alpinus strain R3.8 and its annotation data, which will facilitate exploitation of potential novel cold-active enzymes. |
format |
Article in Journal/Newspaper |
author |
Wah-Seng See-Too Robson Ee Yan-Lue Lim Convey, Peter Pearce, David Taznim Mohidin Yin, Wai-Fong Chan, Kok |
author_facet |
Wah-Seng See-Too Robson Ee Yan-Lue Lim Convey, Peter Pearce, David Taznim Mohidin Yin, Wai-Fong Chan, Kok |
author_sort |
Wah-Seng See-Too |
title |
Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
title_short |
Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
title_full |
Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
title_fullStr |
Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
title_full_unstemmed |
Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis |
title_sort |
complete genome of arthrobacter alpinus strain r3.8, bioremediation potential unraveled with genomic analysis |
publisher |
Figshare |
publishDate |
2017 |
url |
https://dx.doi.org/10.6084/m9.figshare.c.3871957 https://springernature.figshare.com/collections/Complete_genome_of_Arthrobacter_alpinus_strain_R3_8_bioremediation_potential_unraveled_with_genomic_analysis/3871957 |
long_lat |
ENVELOPE(-68.914,-68.914,-67.762,-67.762) ENVELOPE(-68.130,-68.130,-67.568,-67.568) ENVELOPE(-68.133,-68.133,-67.567,-67.567) |
geographic |
Adelaide Island Antarctic Antarctic Peninsula Rothera Rothera Point The Antarctic |
geographic_facet |
Adelaide Island Antarctic Antarctic Peninsula Rothera Rothera Point The Antarctic |
genre |
Adelaide Island Antarc* Antarctic Antarctic Peninsula |
genre_facet |
Adelaide Island Antarc* Antarctic Antarctic Peninsula |
op_relation |
https://dx.doi.org/10.1186/s40793-017-0264-0 |
op_rights |
CC BY 4.0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.c.3871957 https://doi.org/10.1186/s40793-017-0264-0 |
_version_ |
1766347062361718784 |