Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents
Primer sequences for 16S and six protein-coding genes of Bathymodiolus mussels’ symbionts. Table S2. Barcodes used for the amplification of (A) symbiont 16S rRNA encoding gene from 45 individual host mussels and (B) symbiont protein-coding genes from 72 individuals of host mussel. Table S3. Bacteria...
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ftdatacite:10.6084/m9.figshare.c.3791164_d1 2023-05-15T13:43:34+02:00 Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents Phuong-Thao Ho Eunji Park Hong, Soon Kim, Eun-Hye Kangchon Kim Sook-Jin Jang Vrijenhoek, Robert Won, Yong-Jin 2017 https://dx.doi.org/10.6084/m9.figshare.c.3791164_d1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_Table_S1_of_Geographical_structure_of_endosymbiotic_bacteria_hosted_by_Bathymodiolus_mussels_at_eastern_Pacific_hydrothermal_vents/5053012 unknown Figshare https://dx.doi.org/10.1186/s12862-017-0966-3 CC BY + CC0 https://creativecommons.org/licenses/by/4.0 CC0 Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology Ecology Immunology FOS Clinical medicine Marine Biology Cancer Inorganic Chemistry FOS Chemical sciences Plant Biology Paper Text article-journal ScholarlyArticle 2017 ftdatacite https://doi.org/10.6084/m9.figshare.c.3791164_d1 https://doi.org/10.1186/s12862-017-0966-3 2021-11-05T12:55:41Z Primer sequences for 16S and six protein-coding genes of Bathymodiolus mussels’ symbionts. Table S2. Barcodes used for the amplification of (A) symbiont 16S rRNA encoding gene from 45 individual host mussels and (B) symbiont protein-coding genes from 72 individuals of host mussel. Table S3. Bacterial symbiont community in the gill tissues of host mussels, B. thermophilus and B. antarcticus, based on high-throughput data of 16S ribosomal RNA encoding gene from 45 individual host mussels. Table S4. Frequency distribution of Bathymodiolus symbiotic bacteria 16S phylotypes at seven vent localities. Table S5. Genetic diversity indices of symbiont 16S rRNA encoding gene from 45 individuals of host Bathymodiolus mussels in the EPR and PAR. Table S6. Summary table of synonymous and nonsynonymous substitutions of six protein-coding genes between two geographic groups, EPR + GAR and PAR. Table S7. Genetic diversity indices of symbiont protein-coding genes from 72 individuals of host Bathymodiolus mussels in the EPR, GAR, and PAR (based on 1% error correction criterion for the 454 pyrosequencing raw data). (DOCX 25 kb) Report Antarc* antarcticus DataCite Metadata Store (German National Library of Science and Technology) Gar’ ENVELOPE(162.014,162.014,57.140,57.140) Pacific |
institution |
Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology Ecology Immunology FOS Clinical medicine Marine Biology Cancer Inorganic Chemistry FOS Chemical sciences Plant Biology |
spellingShingle |
Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology Ecology Immunology FOS Clinical medicine Marine Biology Cancer Inorganic Chemistry FOS Chemical sciences Plant Biology Phuong-Thao Ho Eunji Park Hong, Soon Kim, Eun-Hye Kangchon Kim Sook-Jin Jang Vrijenhoek, Robert Won, Yong-Jin Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
topic_facet |
Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology Ecology Immunology FOS Clinical medicine Marine Biology Cancer Inorganic Chemistry FOS Chemical sciences Plant Biology |
description |
Primer sequences for 16S and six protein-coding genes of Bathymodiolus mussels’ symbionts. Table S2. Barcodes used for the amplification of (A) symbiont 16S rRNA encoding gene from 45 individual host mussels and (B) symbiont protein-coding genes from 72 individuals of host mussel. Table S3. Bacterial symbiont community in the gill tissues of host mussels, B. thermophilus and B. antarcticus, based on high-throughput data of 16S ribosomal RNA encoding gene from 45 individual host mussels. Table S4. Frequency distribution of Bathymodiolus symbiotic bacteria 16S phylotypes at seven vent localities. Table S5. Genetic diversity indices of symbiont 16S rRNA encoding gene from 45 individuals of host Bathymodiolus mussels in the EPR and PAR. Table S6. Summary table of synonymous and nonsynonymous substitutions of six protein-coding genes between two geographic groups, EPR + GAR and PAR. Table S7. Genetic diversity indices of symbiont protein-coding genes from 72 individuals of host Bathymodiolus mussels in the EPR, GAR, and PAR (based on 1% error correction criterion for the 454 pyrosequencing raw data). (DOCX 25 kb) |
format |
Report |
author |
Phuong-Thao Ho Eunji Park Hong, Soon Kim, Eun-Hye Kangchon Kim Sook-Jin Jang Vrijenhoek, Robert Won, Yong-Jin |
author_facet |
Phuong-Thao Ho Eunji Park Hong, Soon Kim, Eun-Hye Kangchon Kim Sook-Jin Jang Vrijenhoek, Robert Won, Yong-Jin |
author_sort |
Phuong-Thao Ho |
title |
Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
title_short |
Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
title_full |
Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
title_fullStr |
Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
title_full_unstemmed |
Additional file 1: Table S1. of Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents |
title_sort |
additional file 1: table s1. of geographical structure of endosymbiotic bacteria hosted by bathymodiolus mussels at eastern pacific hydrothermal vents |
publisher |
Figshare |
publishDate |
2017 |
url |
https://dx.doi.org/10.6084/m9.figshare.c.3791164_d1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_Table_S1_of_Geographical_structure_of_endosymbiotic_bacteria_hosted_by_Bathymodiolus_mussels_at_eastern_Pacific_hydrothermal_vents/5053012 |
long_lat |
ENVELOPE(162.014,162.014,57.140,57.140) |
geographic |
Gar’ Pacific |
geographic_facet |
Gar’ Pacific |
genre |
Antarc* antarcticus |
genre_facet |
Antarc* antarcticus |
op_relation |
https://dx.doi.org/10.1186/s12862-017-0966-3 |
op_rights |
CC BY + CC0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC0 |
op_doi |
https://doi.org/10.6084/m9.figshare.c.3791164_d1 https://doi.org/10.1186/s12862-017-0966-3 |
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1766190659577839616 |