Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median va...
Main Authors: | , , , , , , |
---|---|
Format: | Report |
Language: | unknown |
Published: |
Figshare
2016
|
Subjects: | |
Online Access: | https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806 |
id |
ftdatacite:10.6084/m9.figshare.c.3645989_d3 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.6084/m9.figshare.c.3645989_d3 2023-05-15T15:27:14+02:00 Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism Fekadu Yadetie Bjørneklett, Silje Garberg, Hilde Oveland, Eystein Berven, Frode Goksøyr, Anders Karlsen, Odd 2016 https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806 unknown Figshare https://dx.doi.org/10.1186/s12864-016-2864-2 CC BY + CC0 https://creativecommons.org/licenses/by/4.0 CC0 Biochemistry Genetics FOS Biological sciences Physiology 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry Paper Text article-journal ScholarlyArticle 2016 ftdatacite https://doi.org/10.6084/m9.figshare.c.3645989_d3 https://doi.org/10.1186/s12864-016-2864-2 2021-11-05T12:55:41Z Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median values was log2 -transformed and plotted for the control (black line), 0.5 mg/kg BW MeHg (red line) and 2 mg/kg BW MeHg (green line) group (Graph Pad Prism using auto bin range and width); Figure S3. SRM-quantification of differential expression for the proteins APOA4, represented by three peptides (A-C), and CATZ (D); Figure S4 - STRING protein-protein interaction network of differentially regulated proteins; Figure S5. Venn diagram showing shared annotations between proteomics and transcriptomics datasets; Figure S6. Networks of combined differentially regulated genes identified in transcriptomics and proteomics analyses in MeHg treated samples; Figure S7. Venn diagram showing shared annotations among liver proteomics, liver transcriptomics and brain proteomics datasets. (DOCX 11788 kb) Report atlantic cod Gadus morhua DataCite Metadata Store (German National Library of Science and Technology) Venn ENVELOPE(9.281,9.281,63.350,63.350) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Biochemistry Genetics FOS Biological sciences Physiology 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry |
spellingShingle |
Biochemistry Genetics FOS Biological sciences Physiology 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry Fekadu Yadetie Bjørneklett, Silje Garberg, Hilde Oveland, Eystein Berven, Frode Goksøyr, Anders Karlsen, Odd Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
topic_facet |
Biochemistry Genetics FOS Biological sciences Physiology 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry |
description |
Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median values was log2 -transformed and plotted for the control (black line), 0.5 mg/kg BW MeHg (red line) and 2 mg/kg BW MeHg (green line) group (Graph Pad Prism using auto bin range and width); Figure S3. SRM-quantification of differential expression for the proteins APOA4, represented by three peptides (A-C), and CATZ (D); Figure S4 - STRING protein-protein interaction network of differentially regulated proteins; Figure S5. Venn diagram showing shared annotations between proteomics and transcriptomics datasets; Figure S6. Networks of combined differentially regulated genes identified in transcriptomics and proteomics analyses in MeHg treated samples; Figure S7. Venn diagram showing shared annotations among liver proteomics, liver transcriptomics and brain proteomics datasets. (DOCX 11788 kb) |
format |
Report |
author |
Fekadu Yadetie Bjørneklett, Silje Garberg, Hilde Oveland, Eystein Berven, Frode Goksøyr, Anders Karlsen, Odd |
author_facet |
Fekadu Yadetie Bjørneklett, Silje Garberg, Hilde Oveland, Eystein Berven, Frode Goksøyr, Anders Karlsen, Odd |
author_sort |
Fekadu Yadetie |
title |
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
title_short |
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
title_full |
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
title_fullStr |
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
title_full_unstemmed |
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
title_sort |
additional file 1: of quantitative analyses of the hepatic proteome of methylmercury-exposed atlantic cod (gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism |
publisher |
Figshare |
publishDate |
2016 |
url |
https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806 |
long_lat |
ENVELOPE(9.281,9.281,63.350,63.350) |
geographic |
Venn |
geographic_facet |
Venn |
genre |
atlantic cod Gadus morhua |
genre_facet |
atlantic cod Gadus morhua |
op_relation |
https://dx.doi.org/10.1186/s12864-016-2864-2 |
op_rights |
CC BY + CC0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC0 |
op_doi |
https://doi.org/10.6084/m9.figshare.c.3645989_d3 https://doi.org/10.1186/s12864-016-2864-2 |
_version_ |
1766357681819353088 |