Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism

Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median va...

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Main Authors: Fekadu Yadetie, Bjørneklett, Silje, Garberg, Hilde, Oveland, Eystein, Berven, Frode, Goksøyr, Anders, Karlsen, Odd
Format: Report
Language:unknown
Published: Figshare 2016
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806/1
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spelling ftdatacite:10.6084/m9.figshare.c.3645989_d3.v1 2023-05-15T15:27:14+02:00 Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism Fekadu Yadetie Bjørneklett, Silje Garberg, Hilde Oveland, Eystein Berven, Frode Goksøyr, Anders Karlsen, Odd 2016 https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806/1 unknown Figshare https://dx.doi.org/10.1186/s12864-016-2864-2 https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3 CC BY + CC0 https://creativecommons.org/licenses/by/4.0 CC0 Biochemistry Genetics FOS Biological sciences Physiology 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry Paper Text article-journal ScholarlyArticle 2016 ftdatacite https://doi.org/10.6084/m9.figshare.c.3645989_d3.v1 https://doi.org/10.1186/s12864-016-2864-2 https://doi.org/10.6084/m9.figshare.c.3645989_d3 2021-11-05T12:55:41Z Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median values was log2 -transformed and plotted for the control (black line), 0.5 mg/kg BW MeHg (red line) and 2 mg/kg BW MeHg (green line) group (Graph Pad Prism using auto bin range and width); Figure S3. SRM-quantification of differential expression for the proteins APOA4, represented by three peptides (A-C), and CATZ (D); Figure S4 - STRING protein-protein interaction network of differentially regulated proteins; Figure S5. Venn diagram showing shared annotations between proteomics and transcriptomics datasets; Figure S6. Networks of combined differentially regulated genes identified in transcriptomics and proteomics analyses in MeHg treated samples; Figure S7. Venn diagram showing shared annotations among liver proteomics, liver transcriptomics and brain proteomics datasets. (DOCX 11788 kb) Report atlantic cod Gadus morhua DataCite Metadata Store (German National Library of Science and Technology) Venn ENVELOPE(9.281,9.281,63.350,63.350)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Genetics
FOS Biological sciences
Physiology
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
spellingShingle Biochemistry
Genetics
FOS Biological sciences
Physiology
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
Fekadu Yadetie
Bjørneklett, Silje
Garberg, Hilde
Oveland, Eystein
Berven, Frode
Goksøyr, Anders
Karlsen, Odd
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
topic_facet Biochemistry
Genetics
FOS Biological sciences
Physiology
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
description Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median values was log2 -transformed and plotted for the control (black line), 0.5 mg/kg BW MeHg (red line) and 2 mg/kg BW MeHg (green line) group (Graph Pad Prism using auto bin range and width); Figure S3. SRM-quantification of differential expression for the proteins APOA4, represented by three peptides (A-C), and CATZ (D); Figure S4 - STRING protein-protein interaction network of differentially regulated proteins; Figure S5. Venn diagram showing shared annotations between proteomics and transcriptomics datasets; Figure S6. Networks of combined differentially regulated genes identified in transcriptomics and proteomics analyses in MeHg treated samples; Figure S7. Venn diagram showing shared annotations among liver proteomics, liver transcriptomics and brain proteomics datasets. (DOCX 11788 kb)
format Report
author Fekadu Yadetie
Bjørneklett, Silje
Garberg, Hilde
Oveland, Eystein
Berven, Frode
Goksøyr, Anders
Karlsen, Odd
author_facet Fekadu Yadetie
Bjørneklett, Silje
Garberg, Hilde
Oveland, Eystein
Berven, Frode
Goksøyr, Anders
Karlsen, Odd
author_sort Fekadu Yadetie
title Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
title_short Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
title_full Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
title_fullStr Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
title_full_unstemmed Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
title_sort additional file 1: of quantitative analyses of the hepatic proteome of methylmercury-exposed atlantic cod (gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
publisher Figshare
publishDate 2016
url https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Quantitative_analyses_of_the_hepatic_proteome_of_methylmercury-exposed_Atlantic_cod_Gadus_morhua_suggest_oxidative_stress-mediated_effects_on_cellular_energy_metabolism/4473806/1
long_lat ENVELOPE(9.281,9.281,63.350,63.350)
geographic Venn
geographic_facet Venn
genre atlantic cod
Gadus morhua
genre_facet atlantic cod
Gadus morhua
op_relation https://dx.doi.org/10.1186/s12864-016-2864-2
https://dx.doi.org/10.6084/m9.figshare.c.3645989_d3
op_rights CC BY + CC0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC0
op_doi https://doi.org/10.6084/m9.figshare.c.3645989_d3.v1
https://doi.org/10.1186/s12864-016-2864-2
https://doi.org/10.6084/m9.figshare.c.3645989_d3
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