Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response

Abstract Background Human activities have led to a substantial increase in carbon dioxide (CO2) emission, with further increases predicted. A RNA-Seq study on adult Saccostrea glomerata was carried out to examine the molecular response of this bivalve species to elevated pCO2. Results A total of 162...

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Main Authors: Ertl, Nicole, O’Connor, Wayne, Wiegand, Aaron, Elizur, Abigail
Format: Article in Journal/Newspaper
Language:unknown
Published: Figshare 2016
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3640811.v1
https://figshare.com/collections/Molecular_analysis_of_the_Sydney_rock_oyster_Saccostrea_glomerata_CO2_stress_response/3640811/1
id ftdatacite:10.6084/m9.figshare.c.3640811.v1
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spelling ftdatacite:10.6084/m9.figshare.c.3640811.v1 2023-05-15T17:51:44+02:00 Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response Ertl, Nicole O’Connor, Wayne Wiegand, Aaron Elizur, Abigail 2016 https://dx.doi.org/10.6084/m9.figshare.c.3640811.v1 https://figshare.com/collections/Molecular_analysis_of_the_Sydney_rock_oyster_Saccostrea_glomerata_CO2_stress_response/3640811/1 unknown Figshare https://dx.doi.org/10.1186/s40665-016-0019-y https://dx.doi.org/10.6084/m9.figshare.c.3640811 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Biochemistry Genetics FOS Biological sciences Molecular Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Developmental Biology Inorganic Chemistry Collection article 2016 ftdatacite https://doi.org/10.6084/m9.figshare.c.3640811.v1 https://doi.org/10.1186/s40665-016-0019-y https://doi.org/10.6084/m9.figshare.c.3640811 2021-11-05T12:55:41Z Abstract Background Human activities have led to a substantial increase in carbon dioxide (CO2) emission, with further increases predicted. A RNA-Seq study on adult Saccostrea glomerata was carried out to examine the molecular response of this bivalve species to elevated pCO2. Results A total of 1626â S. glomerata transcripts were found to be differentially expressed in oysters exposed to elevated pCO2 when compared to control oysters. These transcripts cover a range of functions, from immunity (e.g. pattern recognition receptors, antimicrobial peptides), to respiration (e.g. antioxidants, mitochondrial respiratory chain proteins) and biomineralisation (e.g. carbonic anhydrase). Overall, elevated levels of CO2 appear to have resulted in a priming of the immune system and in producing countermeasures to potential oxidative stress. CO2 exposure also seems to have resulted in an increase in the expression of proteins involved in protein synthesis, whereas transcripts putatively coding for proteins with a role in cilia and flagella function were down-regulated in response to the stressor. In addition, while some of the transcripts related to biomineralisation were up-regulated (e.g. carbonic anhydrase 2, alkaline phosphatase), a small group was down-regulated (e.g. perlucin). Conclusions This study highlighted the complex molecular response of the bivalve S. glomerata to expected near-future ocean acidification levels. While there are indications that the oyster attempted to adapt to the stressor, gauged by immune system priming and the increase in protein synthesis, some processes such cilia function appear to have been negatively affected by the elevated levels of CO2. Article in Journal/Newspaper Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Developmental Biology
Inorganic Chemistry
spellingShingle Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Developmental Biology
Inorganic Chemistry
Ertl, Nicole
O’Connor, Wayne
Wiegand, Aaron
Elizur, Abigail
Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
topic_facet Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Developmental Biology
Inorganic Chemistry
description Abstract Background Human activities have led to a substantial increase in carbon dioxide (CO2) emission, with further increases predicted. A RNA-Seq study on adult Saccostrea glomerata was carried out to examine the molecular response of this bivalve species to elevated pCO2. Results A total of 1626â S. glomerata transcripts were found to be differentially expressed in oysters exposed to elevated pCO2 when compared to control oysters. These transcripts cover a range of functions, from immunity (e.g. pattern recognition receptors, antimicrobial peptides), to respiration (e.g. antioxidants, mitochondrial respiratory chain proteins) and biomineralisation (e.g. carbonic anhydrase). Overall, elevated levels of CO2 appear to have resulted in a priming of the immune system and in producing countermeasures to potential oxidative stress. CO2 exposure also seems to have resulted in an increase in the expression of proteins involved in protein synthesis, whereas transcripts putatively coding for proteins with a role in cilia and flagella function were down-regulated in response to the stressor. In addition, while some of the transcripts related to biomineralisation were up-regulated (e.g. carbonic anhydrase 2, alkaline phosphatase), a small group was down-regulated (e.g. perlucin). Conclusions This study highlighted the complex molecular response of the bivalve S. glomerata to expected near-future ocean acidification levels. While there are indications that the oyster attempted to adapt to the stressor, gauged by immune system priming and the increase in protein synthesis, some processes such cilia function appear to have been negatively affected by the elevated levels of CO2.
format Article in Journal/Newspaper
author Ertl, Nicole
O’Connor, Wayne
Wiegand, Aaron
Elizur, Abigail
author_facet Ertl, Nicole
O’Connor, Wayne
Wiegand, Aaron
Elizur, Abigail
author_sort Ertl, Nicole
title Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
title_short Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
title_full Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
title_fullStr Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
title_full_unstemmed Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response
title_sort molecular analysis of the sydney rock oyster (saccostrea glomerata) co2 stress response
publisher Figshare
publishDate 2016
url https://dx.doi.org/10.6084/m9.figshare.c.3640811.v1
https://figshare.com/collections/Molecular_analysis_of_the_Sydney_rock_oyster_Saccostrea_glomerata_CO2_stress_response/3640811/1
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://dx.doi.org/10.1186/s40665-016-0019-y
https://dx.doi.org/10.6084/m9.figshare.c.3640811
op_rights CC BY 4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.c.3640811.v1
https://doi.org/10.1186/s40665-016-0019-y
https://doi.org/10.6084/m9.figshare.c.3640811
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