Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
Abstract The actinobacterium Rhodococcus sp. JG-3 is an aerobic, eurypsychrophilic, soil bacterium isolated from permafrost in the hyper arid Upper Dry Valleys of Antarctica. It is yellow pigmented, gram positive, moderately halotolerant and capable of growth from 30 °C down to at least −5 °C. The 5...
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ftdatacite:10.6084/m9.figshare.c.3618833 2023-05-15T13:58:34+02:00 Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost Goordial, Jacqueline Raymond-Bouchard, Isabelle Ronholm, Jennifer Shapiro, Nicole Woyke, Tanja Whyte, Lyle Bakermans, Corien 2015 https://dx.doi.org/10.6084/m9.figshare.c.3618833 https://figshare.com/collections/Improved-high-quality_draft_genome_sequence_of_Rhodococcus_sp_JG-3_a_eurypsychrophilic_Actinobacteria_from_Antarctic_Dry_Valley_permafrost/3618833 unknown Figshare https://dx.doi.org/10.1186/s40793-015-0043-8 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Medicine Microbiology FOS Biological sciences Genetics Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified 110309 Infectious Diseases FOS Health sciences Computational Biology Collection article 2015 ftdatacite https://doi.org/10.6084/m9.figshare.c.3618833 https://doi.org/10.1186/s40793-015-0043-8 2021-11-05T12:55:41Z Abstract The actinobacterium Rhodococcus sp. JG-3 is an aerobic, eurypsychrophilic, soil bacterium isolated from permafrost in the hyper arid Upper Dry Valleys of Antarctica. It is yellow pigmented, gram positive, moderately halotolerant and capable of growth from 30 °C down to at least −5 °C. The 5.28 Mb high-quality-draft genome is arranged into 6 scaffolds, containing 9 contigs and 4998 protein coding genes, with 64 % GC content. Increasing the availability of genome sequences from cold-adapted species is crucial to gaining a better understanding of the molecular traits of cold adaptation in microbes. Article in Journal/Newspaper Antarc* Antarctic Antarctica permafrost DataCite Metadata Store (German National Library of Science and Technology) Antarctic |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Medicine Microbiology FOS Biological sciences Genetics Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified 110309 Infectious Diseases FOS Health sciences Computational Biology |
spellingShingle |
Medicine Microbiology FOS Biological sciences Genetics Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified 110309 Infectious Diseases FOS Health sciences Computational Biology Goordial, Jacqueline Raymond-Bouchard, Isabelle Ronholm, Jennifer Shapiro, Nicole Woyke, Tanja Whyte, Lyle Bakermans, Corien Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
topic_facet |
Medicine Microbiology FOS Biological sciences Genetics Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified 110309 Infectious Diseases FOS Health sciences Computational Biology |
description |
Abstract The actinobacterium Rhodococcus sp. JG-3 is an aerobic, eurypsychrophilic, soil bacterium isolated from permafrost in the hyper arid Upper Dry Valleys of Antarctica. It is yellow pigmented, gram positive, moderately halotolerant and capable of growth from 30 °C down to at least −5 °C. The 5.28 Mb high-quality-draft genome is arranged into 6 scaffolds, containing 9 contigs and 4998 protein coding genes, with 64 % GC content. Increasing the availability of genome sequences from cold-adapted species is crucial to gaining a better understanding of the molecular traits of cold adaptation in microbes. |
format |
Article in Journal/Newspaper |
author |
Goordial, Jacqueline Raymond-Bouchard, Isabelle Ronholm, Jennifer Shapiro, Nicole Woyke, Tanja Whyte, Lyle Bakermans, Corien |
author_facet |
Goordial, Jacqueline Raymond-Bouchard, Isabelle Ronholm, Jennifer Shapiro, Nicole Woyke, Tanja Whyte, Lyle Bakermans, Corien |
author_sort |
Goordial, Jacqueline |
title |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
title_short |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
title_full |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
title_fullStr |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
title_full_unstemmed |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost |
title_sort |
improved-high-quality draft genome sequence of rhodococcus sp. jg-3, a eurypsychrophilic actinobacteria from antarctic dry valley permafrost |
publisher |
Figshare |
publishDate |
2015 |
url |
https://dx.doi.org/10.6084/m9.figshare.c.3618833 https://figshare.com/collections/Improved-high-quality_draft_genome_sequence_of_Rhodococcus_sp_JG-3_a_eurypsychrophilic_Actinobacteria_from_Antarctic_Dry_Valley_permafrost/3618833 |
geographic |
Antarctic |
geographic_facet |
Antarctic |
genre |
Antarc* Antarctic Antarctica permafrost |
genre_facet |
Antarc* Antarctic Antarctica permafrost |
op_relation |
https://dx.doi.org/10.1186/s40793-015-0043-8 |
op_rights |
CC BY 4.0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.c.3618833 https://doi.org/10.1186/s40793-015-0043-8 |
_version_ |
1766266915820404736 |