Cold shock induction of recombinant Arctic environmental genes
Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant...
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ftdatacite:10.6084/m9.figshare.c.3614681.v1 2023-05-15T14:59:19+02:00 Cold shock induction of recombinant Arctic environmental genes Bjerga, Gro Williamson, Adele 2015 https://dx.doi.org/10.6084/m9.figshare.c.3614681.v1 https://figshare.com/collections/Cold_shock_induction_of_recombinant_Arctic_environmental_genes/3614681/1 unknown Figshare https://dx.doi.org/10.1186/s12896-015-0185-1 https://dx.doi.org/10.6084/m9.figshare.c.3614681 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Biochemistry Microbiology FOS Biological sciences Genetics Biotechnology Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Cancer Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Computational Biology Collection article 2015 ftdatacite https://doi.org/10.6084/m9.figshare.c.3614681.v1 https://doi.org/10.1186/s12896-015-0185-1 https://doi.org/10.6084/m9.figshare.c.3614681 2021-11-05T12:55:41Z Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant barrier to their exploitation for commercial applications in industry. Methods As part of an enzyme discovery project we have investigated the utility of a cold-shock inducible promoter for low-temperature expression of five diverse genes derived from the metagenomes of marine Arctic sediments. After evaluation of their production, we further optimized for soluble production by building a vector suite from which the environmental genes could be expressed as fusions with solubility tags. Results We found that the low-temperature optimized system produced high expression levels for all putatively cold-active proteins, as well as reducing host toxicity for several candidates. As a proof of concept, activity assays with one of the candidates, a putative chitinase, showed that functional protein was obtained using the low-temperature optimized vector suite. Conclusions We conclude that a cold-shock inducible system is advantageous for the heterologous expression of psychrophilic proteins, and may also be useful for expression of toxic mesophilic and thermophilic proteins where properties of the proteins are deleterious to the host cell growth. Article in Journal/Newspaper Arctic DataCite Metadata Store (German National Library of Science and Technology) Arctic |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
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language |
unknown |
topic |
Biochemistry Microbiology FOS Biological sciences Genetics Biotechnology Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Cancer Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Computational Biology |
spellingShingle |
Biochemistry Microbiology FOS Biological sciences Genetics Biotechnology Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Cancer Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Computational Biology Bjerga, Gro Williamson, Adele Cold shock induction of recombinant Arctic environmental genes |
topic_facet |
Biochemistry Microbiology FOS Biological sciences Genetics Biotechnology Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Cancer Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Computational Biology |
description |
Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant barrier to their exploitation for commercial applications in industry. Methods As part of an enzyme discovery project we have investigated the utility of a cold-shock inducible promoter for low-temperature expression of five diverse genes derived from the metagenomes of marine Arctic sediments. After evaluation of their production, we further optimized for soluble production by building a vector suite from which the environmental genes could be expressed as fusions with solubility tags. Results We found that the low-temperature optimized system produced high expression levels for all putatively cold-active proteins, as well as reducing host toxicity for several candidates. As a proof of concept, activity assays with one of the candidates, a putative chitinase, showed that functional protein was obtained using the low-temperature optimized vector suite. Conclusions We conclude that a cold-shock inducible system is advantageous for the heterologous expression of psychrophilic proteins, and may also be useful for expression of toxic mesophilic and thermophilic proteins where properties of the proteins are deleterious to the host cell growth. |
format |
Article in Journal/Newspaper |
author |
Bjerga, Gro Williamson, Adele |
author_facet |
Bjerga, Gro Williamson, Adele |
author_sort |
Bjerga, Gro |
title |
Cold shock induction of recombinant Arctic environmental genes |
title_short |
Cold shock induction of recombinant Arctic environmental genes |
title_full |
Cold shock induction of recombinant Arctic environmental genes |
title_fullStr |
Cold shock induction of recombinant Arctic environmental genes |
title_full_unstemmed |
Cold shock induction of recombinant Arctic environmental genes |
title_sort |
cold shock induction of recombinant arctic environmental genes |
publisher |
Figshare |
publishDate |
2015 |
url |
https://dx.doi.org/10.6084/m9.figshare.c.3614681.v1 https://figshare.com/collections/Cold_shock_induction_of_recombinant_Arctic_environmental_genes/3614681/1 |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic |
genre_facet |
Arctic |
op_relation |
https://dx.doi.org/10.1186/s12896-015-0185-1 https://dx.doi.org/10.6084/m9.figshare.c.3614681 |
op_rights |
CC BY 4.0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.c.3614681.v1 https://doi.org/10.1186/s12896-015-0185-1 https://doi.org/10.6084/m9.figshare.c.3614681 |
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1766331435935858688 |