Cold shock induction of recombinant Arctic environmental genes

Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant...

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Main Authors: Bjerga, Gro, Williamson, Adele
Format: Article in Journal/Newspaper
Language:unknown
Published: Figshare 2015
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3614681.v1
https://figshare.com/collections/Cold_shock_induction_of_recombinant_Arctic_environmental_genes/3614681/1
id ftdatacite:10.6084/m9.figshare.c.3614681.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.c.3614681.v1 2023-05-15T14:59:19+02:00 Cold shock induction of recombinant Arctic environmental genes Bjerga, Gro Williamson, Adele 2015 https://dx.doi.org/10.6084/m9.figshare.c.3614681.v1 https://figshare.com/collections/Cold_shock_induction_of_recombinant_Arctic_environmental_genes/3614681/1 unknown Figshare https://dx.doi.org/10.1186/s12896-015-0185-1 https://dx.doi.org/10.6084/m9.figshare.c.3614681 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Biochemistry Microbiology FOS Biological sciences Genetics Biotechnology Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Cancer Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Computational Biology Collection article 2015 ftdatacite https://doi.org/10.6084/m9.figshare.c.3614681.v1 https://doi.org/10.1186/s12896-015-0185-1 https://doi.org/10.6084/m9.figshare.c.3614681 2021-11-05T12:55:41Z Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant barrier to their exploitation for commercial applications in industry. Methods As part of an enzyme discovery project we have investigated the utility of a cold-shock inducible promoter for low-temperature expression of five diverse genes derived from the metagenomes of marine Arctic sediments. After evaluation of their production, we further optimized for soluble production by building a vector suite from which the environmental genes could be expressed as fusions with solubility tags. Results We found that the low-temperature optimized system produced high expression levels for all putatively cold-active proteins, as well as reducing host toxicity for several candidates. As a proof of concept, activity assays with one of the candidates, a putative chitinase, showed that functional protein was obtained using the low-temperature optimized vector suite. Conclusions We conclude that a cold-shock inducible system is advantageous for the heterologous expression of psychrophilic proteins, and may also be useful for expression of toxic mesophilic and thermophilic proteins where properties of the proteins are deleterious to the host cell growth. Article in Journal/Newspaper Arctic DataCite Metadata Store (German National Library of Science and Technology) Arctic
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Microbiology
FOS Biological sciences
Genetics
Biotechnology
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Cancer
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
Computational Biology
spellingShingle Biochemistry
Microbiology
FOS Biological sciences
Genetics
Biotechnology
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Cancer
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
Computational Biology
Bjerga, Gro
Williamson, Adele
Cold shock induction of recombinant Arctic environmental genes
topic_facet Biochemistry
Microbiology
FOS Biological sciences
Genetics
Biotechnology
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Cancer
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
Computational Biology
description Abstract Background Heterologous expression of psychrophilic enzymes in E. coli is particularly challenging due to their intrinsic instability. The low stability is regarded as a consequence of adaptation that allow them to function at low temperatures. Recombinant production presents a significant barrier to their exploitation for commercial applications in industry. Methods As part of an enzyme discovery project we have investigated the utility of a cold-shock inducible promoter for low-temperature expression of five diverse genes derived from the metagenomes of marine Arctic sediments. After evaluation of their production, we further optimized for soluble production by building a vector suite from which the environmental genes could be expressed as fusions with solubility tags. Results We found that the low-temperature optimized system produced high expression levels for all putatively cold-active proteins, as well as reducing host toxicity for several candidates. As a proof of concept, activity assays with one of the candidates, a putative chitinase, showed that functional protein was obtained using the low-temperature optimized vector suite. Conclusions We conclude that a cold-shock inducible system is advantageous for the heterologous expression of psychrophilic proteins, and may also be useful for expression of toxic mesophilic and thermophilic proteins where properties of the proteins are deleterious to the host cell growth.
format Article in Journal/Newspaper
author Bjerga, Gro
Williamson, Adele
author_facet Bjerga, Gro
Williamson, Adele
author_sort Bjerga, Gro
title Cold shock induction of recombinant Arctic environmental genes
title_short Cold shock induction of recombinant Arctic environmental genes
title_full Cold shock induction of recombinant Arctic environmental genes
title_fullStr Cold shock induction of recombinant Arctic environmental genes
title_full_unstemmed Cold shock induction of recombinant Arctic environmental genes
title_sort cold shock induction of recombinant arctic environmental genes
publisher Figshare
publishDate 2015
url https://dx.doi.org/10.6084/m9.figshare.c.3614681.v1
https://figshare.com/collections/Cold_shock_induction_of_recombinant_Arctic_environmental_genes/3614681/1
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_relation https://dx.doi.org/10.1186/s12896-015-0185-1
https://dx.doi.org/10.6084/m9.figshare.c.3614681
op_rights CC BY 4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.c.3614681.v1
https://doi.org/10.1186/s12896-015-0185-1
https://doi.org/10.6084/m9.figshare.c.3614681
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