Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America

Abstract Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in A...

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Main Authors: Latutrie, Mathieu, Bergeron, Yves, Tremblay, Francine
Format: Article in Journal/Newspaper
Language:unknown
Published: Figshare 2016
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3611672.v1
https://figshare.com/collections/Fine-scale_assessment_of_genetic_diversity_of_trembling_aspen_in_northwestern_North_America/3611672/1
id ftdatacite:10.6084/m9.figshare.c.3611672.v1
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spelling ftdatacite:10.6084/m9.figshare.c.3611672.v1 2023-05-15T18:49:04+02:00 Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America Latutrie, Mathieu Bergeron, Yves Tremblay, Francine 2016 https://dx.doi.org/10.6084/m9.figshare.c.3611672.v1 https://figshare.com/collections/Fine-scale_assessment_of_genetic_diversity_of_trembling_aspen_in_northwestern_North_America/3611672/1 unknown Figshare https://dx.doi.org/10.1186/s12862-016-0810-1 https://dx.doi.org/10.6084/m9.figshare.c.3611672 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Genetics FOS Biological sciences Evolutionary Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology Collection article 2016 ftdatacite https://doi.org/10.6084/m9.figshare.c.3611672.v1 https://doi.org/10.1186/s12862-016-0810-1 https://doi.org/10.6084/m9.figshare.c.3611672 2021-11-05T12:55:41Z Abstract Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in Alberta may represent a region where small populations persisted during the last glacial maximum (LGM). The purpose of this study was to ascertain whether the origins of trembling aspen in western North America are reflected in the patterns of neutral genetic diversity and population structure. A total of 28 sites were sampled covering the northwestern part of aspen’s distribution, from Saskatchewan to Alaska. Twelve microsatellite markers were used to describe patterns of genetic diversity. The genetic structure of trembling aspen populations was assessed by using multivariate analyses, Mantel correlograms, neighbor-joining trees and Bayesian analysis. Results Microsatellite markers revealed little to no neutral genetic structure of P. tremuloides populations in northwestern North America. Low differentiation among populations and small isolation by distance (IBD) were observed. The most probable number of clusters detected by STRUCTURE was K = 3 (∆K = 5.9). The individuals in the populations of the 3 clusters share a common gene pool and showed a high level of admixture. No evidence was found that either Beringia or the “ice-free corridor” were refugia. Highest allelic richness (AR) and lowest heterozygosity (Ho) were observed in Alberta foothills of the Rocky Mountains. Conclusions Contrary to our hypothesis, our results showed that microsatellite markers revealed little to no genetic structure in P. tremuloides populations. Consequently, no divergent populations were observed near supposed refugia. The lack of detectable refugia in Beringia and in the “ice-free corridor” was due to high levels of gene flow between trembling apsen populations. More favorable environmental conditions for sexual reproduction and successful trembling aspen seedling establishment may have contributed to increase allelic richness through recombination in populations from the Albertan foothills of the Rocky Mountains. Article in Journal/Newspaper Alaska Beringia DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
spellingShingle Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
topic_facet Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
description Abstract Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in Alberta may represent a region where small populations persisted during the last glacial maximum (LGM). The purpose of this study was to ascertain whether the origins of trembling aspen in western North America are reflected in the patterns of neutral genetic diversity and population structure. A total of 28 sites were sampled covering the northwestern part of aspen’s distribution, from Saskatchewan to Alaska. Twelve microsatellite markers were used to describe patterns of genetic diversity. The genetic structure of trembling aspen populations was assessed by using multivariate analyses, Mantel correlograms, neighbor-joining trees and Bayesian analysis. Results Microsatellite markers revealed little to no neutral genetic structure of P. tremuloides populations in northwestern North America. Low differentiation among populations and small isolation by distance (IBD) were observed. The most probable number of clusters detected by STRUCTURE was K = 3 (∆K = 5.9). The individuals in the populations of the 3 clusters share a common gene pool and showed a high level of admixture. No evidence was found that either Beringia or the “ice-free corridor” were refugia. Highest allelic richness (AR) and lowest heterozygosity (Ho) were observed in Alberta foothills of the Rocky Mountains. Conclusions Contrary to our hypothesis, our results showed that microsatellite markers revealed little to no genetic structure in P. tremuloides populations. Consequently, no divergent populations were observed near supposed refugia. The lack of detectable refugia in Beringia and in the “ice-free corridor” was due to high levels of gene flow between trembling apsen populations. More favorable environmental conditions for sexual reproduction and successful trembling aspen seedling establishment may have contributed to increase allelic richness through recombination in populations from the Albertan foothills of the Rocky Mountains.
format Article in Journal/Newspaper
author Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
author_facet Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
author_sort Latutrie, Mathieu
title Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_short Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_full Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_fullStr Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_full_unstemmed Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_sort fine-scale assessment of genetic diversity of trembling aspen in northwestern north america
publisher Figshare
publishDate 2016
url https://dx.doi.org/10.6084/m9.figshare.c.3611672.v1
https://figshare.com/collections/Fine-scale_assessment_of_genetic_diversity_of_trembling_aspen_in_northwestern_North_America/3611672/1
genre Alaska
Beringia
genre_facet Alaska
Beringia
op_relation https://dx.doi.org/10.1186/s12862-016-0810-1
https://dx.doi.org/10.6084/m9.figshare.c.3611672
op_rights CC BY 4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.c.3611672.v1
https://doi.org/10.1186/s12862-016-0810-1
https://doi.org/10.6084/m9.figshare.c.3611672
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