Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda

Abstract Background An emerging field in biomedical research is focusing on the roles of aquaporin water channels in parasites that cause debilitating or lethal diseases to their vertebrate hosts. The primary vectorial agents are hematophagous arthropods, including mosquitoes, flies, ticks and lice,...

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Main Authors: Stavang, Jon, Francois Chauvigné, Kongshaug, Heidi, Cerdà, Joan, Nilsen, Frank, Finn, Roderick
Format: Article in Journal/Newspaper
Language:unknown
Published: Figshare 2015
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3603791
https://figshare.com/collections/Phylogenomic_and_functional_analyses_of_salmon_lice_aquaporins_uncover_the_molecular_diversity_of_the_superfamily_in_Arthropoda/3603791
id ftdatacite:10.6084/m9.figshare.c.3603791
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.c.3603791 2023-05-15T15:32:16+02:00 Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda Stavang, Jon Francois Chauvigné Kongshaug, Heidi Cerdà, Joan Nilsen, Frank Finn, Roderick 2015 https://dx.doi.org/10.6084/m9.figshare.c.3603791 https://figshare.com/collections/Phylogenomic_and_functional_analyses_of_salmon_lice_aquaporins_uncover_the_molecular_diversity_of_the_superfamily_in_Arthropoda/3603791 unknown Figshare https://dx.doi.org/10.1186/s12864-015-1814-8 CC BY 4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Biochemistry Medicine Cell Biology Genetics FOS Biological sciences Evolutionary Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology Developmental Biology Marine Biology Collection article 2015 ftdatacite https://doi.org/10.6084/m9.figshare.c.3603791 https://doi.org/10.1186/s12864-015-1814-8 2021-11-05T12:55:41Z Abstract Background An emerging field in biomedical research is focusing on the roles of aquaporin water channels in parasites that cause debilitating or lethal diseases to their vertebrate hosts. The primary vectorial agents are hematophagous arthropods, including mosquitoes, flies, ticks and lice, however very little is known concerning the functional diversity of aquaporins in non-insect members of the Arthropoda. Here we conducted phylogenomic and functional analyses of aquaporins in the salmon louse, a marine ectoparasitic copepod that feeds on the skin and body fluids of salmonids, and used the primary structures of the isolated channels to uncover the genomic repertoires in Arthropoda. Results Genomic screening identified 7 aquaporin paralogs in the louse in contrast to 42 in its host the Atlantic salmon. Phylogenetic inference of the louse nucleotides and proteins in relation to orthologs identified in Chelicerata, Myriapoda, Crustacea and Hexapoda revealed that the arthropod aquaporin superfamily can be classified into three major grades (1) classical aquaporins including Big brain (Bib) and Prip-like (PripL) channels (2) aquaglyceroporins (Glp) and (3) unorthodox aquaporins (Aqp12-like). In Hexapoda, two additional subfamilies exist as Drip and a recently classified entomoglyceroporin (Eglp) group. Cloning and remapping the louse cDNAs to the genomic DNA revealed that they are encoded by 1–7 exons, with two of the Glps being expressed as N-terminal splice variants (Glp1_v1, −1_v2, −3_v1, −3_v2). Heterologous expression of the cRNAs in amphibian oocytes demonstrated that PripL transports water and urea, while Bib does not. Glp1_v1, −2, −3_v1 and −3_v2 each transport water, glycerol and urea, while Glp1_v2 and the Aqp12-like channels were retained intracellularly. Transcript abundance analyses revealed expression of each louse paralog at all developmental stages, except for glp1_v1, which is specific to preadult and adult males. Conclusions Our data suggest that the aquaporin repertoires of extant arthropods have expanded independently in the different lineages, but can be phylogenetically classified into three major grades as opposed to four present in deuterostome animals. While the aquaporin repertoire of Atlantic salmon represents a 6-fold redundancy compared to the louse, the functional assays reveal that the permeation properties of the different crustacean grades of aquaporin are largely conserved to the vertebrate counterparts. Article in Journal/Newspaper Atlantic salmon DataCite Metadata Store (German National Library of Science and Technology) The Louse ENVELOPE(-56.415,-56.415,51.700,51.700)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Medicine
Cell Biology
Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Developmental Biology
Marine Biology
spellingShingle Biochemistry
Medicine
Cell Biology
Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Developmental Biology
Marine Biology
Stavang, Jon
Francois Chauvigné
Kongshaug, Heidi
Cerdà, Joan
Nilsen, Frank
Finn, Roderick
Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
topic_facet Biochemistry
Medicine
Cell Biology
Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Developmental Biology
Marine Biology
description Abstract Background An emerging field in biomedical research is focusing on the roles of aquaporin water channels in parasites that cause debilitating or lethal diseases to their vertebrate hosts. The primary vectorial agents are hematophagous arthropods, including mosquitoes, flies, ticks and lice, however very little is known concerning the functional diversity of aquaporins in non-insect members of the Arthropoda. Here we conducted phylogenomic and functional analyses of aquaporins in the salmon louse, a marine ectoparasitic copepod that feeds on the skin and body fluids of salmonids, and used the primary structures of the isolated channels to uncover the genomic repertoires in Arthropoda. Results Genomic screening identified 7 aquaporin paralogs in the louse in contrast to 42 in its host the Atlantic salmon. Phylogenetic inference of the louse nucleotides and proteins in relation to orthologs identified in Chelicerata, Myriapoda, Crustacea and Hexapoda revealed that the arthropod aquaporin superfamily can be classified into three major grades (1) classical aquaporins including Big brain (Bib) and Prip-like (PripL) channels (2) aquaglyceroporins (Glp) and (3) unorthodox aquaporins (Aqp12-like). In Hexapoda, two additional subfamilies exist as Drip and a recently classified entomoglyceroporin (Eglp) group. Cloning and remapping the louse cDNAs to the genomic DNA revealed that they are encoded by 1–7 exons, with two of the Glps being expressed as N-terminal splice variants (Glp1_v1, −1_v2, −3_v1, −3_v2). Heterologous expression of the cRNAs in amphibian oocytes demonstrated that PripL transports water and urea, while Bib does not. Glp1_v1, −2, −3_v1 and −3_v2 each transport water, glycerol and urea, while Glp1_v2 and the Aqp12-like channels were retained intracellularly. Transcript abundance analyses revealed expression of each louse paralog at all developmental stages, except for glp1_v1, which is specific to preadult and adult males. Conclusions Our data suggest that the aquaporin repertoires of extant arthropods have expanded independently in the different lineages, but can be phylogenetically classified into three major grades as opposed to four present in deuterostome animals. While the aquaporin repertoire of Atlantic salmon represents a 6-fold redundancy compared to the louse, the functional assays reveal that the permeation properties of the different crustacean grades of aquaporin are largely conserved to the vertebrate counterparts.
format Article in Journal/Newspaper
author Stavang, Jon
Francois Chauvigné
Kongshaug, Heidi
Cerdà, Joan
Nilsen, Frank
Finn, Roderick
author_facet Stavang, Jon
Francois Chauvigné
Kongshaug, Heidi
Cerdà, Joan
Nilsen, Frank
Finn, Roderick
author_sort Stavang, Jon
title Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
title_short Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
title_full Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
title_fullStr Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
title_full_unstemmed Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda
title_sort phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in arthropoda
publisher Figshare
publishDate 2015
url https://dx.doi.org/10.6084/m9.figshare.c.3603791
https://figshare.com/collections/Phylogenomic_and_functional_analyses_of_salmon_lice_aquaporins_uncover_the_molecular_diversity_of_the_superfamily_in_Arthropoda/3603791
long_lat ENVELOPE(-56.415,-56.415,51.700,51.700)
geographic The Louse
geographic_facet The Louse
genre Atlantic salmon
genre_facet Atlantic salmon
op_relation https://dx.doi.org/10.1186/s12864-015-1814-8
op_rights CC BY 4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.c.3603791
https://doi.org/10.1186/s12864-015-1814-8
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