Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya

Figure S1. A) Satellite-based surface chlorophyll-a concentrations (mg/m3) and photosynthetically available radiance (PAR) in the polynya of the Amundsen Sea during the sampling cruises. B) Detailed satellite-based surface chlorophyll-a concentrations (mg/m3) and sampling day of this study. GPS posi...

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Main Authors: So-Jeong Kim, Jong-Geol Kim, Lee, Sang-Hoon, Soo-Je Park, Gwak, Joo-Han, Jung, Man-Young, Won-Hyung Chung, Yang, Eun-Jin, Jisoo Park, Jinyoung Jung, Yoonsoo Hahn, Jang-Cheon Cho, Madsen, Eugene, Rodriguez-Valera, Francisco, Hyun, Jung-Ho, Sung-Keun Rhee
Format: Text
Language:unknown
Published: figshare 2019
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Online Access:https://dx.doi.org/10.6084/m9.figshare.7750697.v1
https://springernature.figshare.com/articles/Additional_file_3_of_Genomic_and_metatranscriptomic_analyses_of_carbon_remineralization_in_an_Antarctic_polynya/7750697/1
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spelling ftdatacite:10.6084/m9.figshare.7750697.v1 2023-05-15T13:24:03+02:00 Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya So-Jeong Kim Jong-Geol Kim Lee, Sang-Hoon Soo-Je Park Gwak, Joo-Han Jung, Man-Young Won-Hyung Chung Yang, Eun-Jin Jisoo Park Jinyoung Jung Yoonsoo Hahn Jang-Cheon Cho Madsen, Eugene Rodriguez-Valera, Francisco Hyun, Jung-Ho Sung-Keun Rhee 2019 https://dx.doi.org/10.6084/m9.figshare.7750697.v1 https://springernature.figshare.com/articles/Additional_file_3_of_Genomic_and_metatranscriptomic_analyses_of_carbon_remineralization_in_an_Antarctic_polynya/7750697/1 unknown figshare https://dx.doi.org/10.1186/s40168-019-0643-4 https://dx.doi.org/10.6084/m9.figshare.7750697 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Genetics Molecular Biology Biotechnology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology 69999 Biological Sciences not elsewhere classified Inorganic Chemistry FOS Chemical sciences Text article-journal Journal contribution ScholarlyArticle 2019 ftdatacite https://doi.org/10.6084/m9.figshare.7750697.v1 https://doi.org/10.1186/s40168-019-0643-4 https://doi.org/10.6084/m9.figshare.7750697 2021-11-05T12:55:41Z Figure S1. A) Satellite-based surface chlorophyll-a concentrations (mg/m3) and photosynthetically available radiance (PAR) in the polynya of the Amundsen Sea during the sampling cruises. B) Detailed satellite-based surface chlorophyll-a concentrations (mg/m3) and sampling day of this study. GPS position polynya center station, 73.25–73.75S, 114.25–113.75 W. The data constructed from multi ocean color sensors were obtained from the Globcolour webpage ( http://hermes.acri.fr/ ). Figure S2. Neighbor-joining tree of the most abundant OTUs in a) Polaribacter, b) Oceanospirillaceae, c) SAR92, and d) SAR11 from PK, DC, and SI. The representative sequences of each OTU selected by QIIME are highlighted in bold and coded as follows: OTU N (=OTU number), site (PK, DC, or SI), and percentage of the total read number. Bootstrap values of ≥ 50% are shown. Figure S3. NMDS plot showing relationships between bacterial compositions and environmental variables. Bray–Curtis stress 0.117. *indicates p Text Amundsen Sea Antarc* Antarctic DataCite Metadata Store (German National Library of Science and Technology) Antarctic Amundsen Sea Bray ENVELOPE(-114.067,-114.067,-74.833,-74.833)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Biotechnology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
spellingShingle Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Biotechnology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
So-Jeong Kim
Jong-Geol Kim
Lee, Sang-Hoon
Soo-Je Park
Gwak, Joo-Han
Jung, Man-Young
Won-Hyung Chung
Yang, Eun-Jin
Jisoo Park
Jinyoung Jung
Yoonsoo Hahn
Jang-Cheon Cho
Madsen, Eugene
Rodriguez-Valera, Francisco
Hyun, Jung-Ho
Sung-Keun Rhee
Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
topic_facet Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Biotechnology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
description Figure S1. A) Satellite-based surface chlorophyll-a concentrations (mg/m3) and photosynthetically available radiance (PAR) in the polynya of the Amundsen Sea during the sampling cruises. B) Detailed satellite-based surface chlorophyll-a concentrations (mg/m3) and sampling day of this study. GPS position polynya center station, 73.25–73.75S, 114.25–113.75 W. The data constructed from multi ocean color sensors were obtained from the Globcolour webpage ( http://hermes.acri.fr/ ). Figure S2. Neighbor-joining tree of the most abundant OTUs in a) Polaribacter, b) Oceanospirillaceae, c) SAR92, and d) SAR11 from PK, DC, and SI. The representative sequences of each OTU selected by QIIME are highlighted in bold and coded as follows: OTU N (=OTU number), site (PK, DC, or SI), and percentage of the total read number. Bootstrap values of ≥ 50% are shown. Figure S3. NMDS plot showing relationships between bacterial compositions and environmental variables. Bray–Curtis stress 0.117. *indicates p
format Text
author So-Jeong Kim
Jong-Geol Kim
Lee, Sang-Hoon
Soo-Je Park
Gwak, Joo-Han
Jung, Man-Young
Won-Hyung Chung
Yang, Eun-Jin
Jisoo Park
Jinyoung Jung
Yoonsoo Hahn
Jang-Cheon Cho
Madsen, Eugene
Rodriguez-Valera, Francisco
Hyun, Jung-Ho
Sung-Keun Rhee
author_facet So-Jeong Kim
Jong-Geol Kim
Lee, Sang-Hoon
Soo-Je Park
Gwak, Joo-Han
Jung, Man-Young
Won-Hyung Chung
Yang, Eun-Jin
Jisoo Park
Jinyoung Jung
Yoonsoo Hahn
Jang-Cheon Cho
Madsen, Eugene
Rodriguez-Valera, Francisco
Hyun, Jung-Ho
Sung-Keun Rhee
author_sort So-Jeong Kim
title Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
title_short Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
title_full Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
title_fullStr Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
title_full_unstemmed Additional file 3: of Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
title_sort additional file 3: of genomic and metatranscriptomic analyses of carbon remineralization in an antarctic polynya
publisher figshare
publishDate 2019
url https://dx.doi.org/10.6084/m9.figshare.7750697.v1
https://springernature.figshare.com/articles/Additional_file_3_of_Genomic_and_metatranscriptomic_analyses_of_carbon_remineralization_in_an_Antarctic_polynya/7750697/1
long_lat ENVELOPE(-114.067,-114.067,-74.833,-74.833)
geographic Antarctic
Amundsen Sea
Bray
geographic_facet Antarctic
Amundsen Sea
Bray
genre Amundsen Sea
Antarc*
Antarctic
genre_facet Amundsen Sea
Antarc*
Antarctic
op_relation https://dx.doi.org/10.1186/s40168-019-0643-4
https://dx.doi.org/10.6084/m9.figshare.7750697
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.7750697.v1
https://doi.org/10.1186/s40168-019-0643-4
https://doi.org/10.6084/m9.figshare.7750697
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