Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank."
Included are VCFs for the SNP datasets used for analysis and a supplementary file detailing Fst outlier SNPs. There is also a population map, where the individual IDs used in the VCFs are mapped to their sampling location. For full details on how these datasets were generated, see the manuscript. 80...
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ftdatacite:10.6084/m9.figshare.7683938.v1 2023-05-15T15:27:21+02:00 Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." Clucas, Gemma 2019 https://dx.doi.org/10.6084/m9.figshare.7683938.v1 https://figshare.com/articles/Data_files_associated_with_the_manuscript_Adaptive_Genetic_Variation_Underlies_Biocomplexity_of_Atlantic_Cod_in_the_Gulf_of_Maine_and_on_Georges_Bank_/7683938/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.7683938 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Marine Biology 60411 Population, Ecological and Evolutionary Genetics FOS Biological sciences dataset Dataset 2019 ftdatacite https://doi.org/10.6084/m9.figshare.7683938.v1 https://doi.org/10.6084/m9.figshare.7683938 2021-11-05T12:55:41Z Included are VCFs for the SNP datasets used for analysis and a supplementary file detailing Fst outlier SNPs. There is also a population map, where the individual IDs used in the VCFs are mapped to their sampling location. For full details on how these datasets were generated, see the manuscript. 800k_reads.filtered.allsnps.vcf = full SNP dataset: 3128 SNPs. 800k_reads.putatively_neutral.recode.vcf = putatively neutral SNP dataset: 2689 SNPs. 800k_reads.filtered.allsnps.max-missing95.recode.vcf = stringent SNP dataset: 1660 SNPs. popmap.txt = file mapping individual IDs to sampling locations. Supplementary_File_outlierSNPs.xlsx = excel spreadsheet with details of the 47 outlier SNPs identified by BayeScan. Dataset atlantic cod DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Marine Biology 60411 Population, Ecological and Evolutionary Genetics FOS Biological sciences |
spellingShingle |
Marine Biology 60411 Population, Ecological and Evolutionary Genetics FOS Biological sciences Clucas, Gemma Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
topic_facet |
Marine Biology 60411 Population, Ecological and Evolutionary Genetics FOS Biological sciences |
description |
Included are VCFs for the SNP datasets used for analysis and a supplementary file detailing Fst outlier SNPs. There is also a population map, where the individual IDs used in the VCFs are mapped to their sampling location. For full details on how these datasets were generated, see the manuscript. 800k_reads.filtered.allsnps.vcf = full SNP dataset: 3128 SNPs. 800k_reads.putatively_neutral.recode.vcf = putatively neutral SNP dataset: 2689 SNPs. 800k_reads.filtered.allsnps.max-missing95.recode.vcf = stringent SNP dataset: 1660 SNPs. popmap.txt = file mapping individual IDs to sampling locations. Supplementary_File_outlierSNPs.xlsx = excel spreadsheet with details of the 47 outlier SNPs identified by BayeScan. |
format |
Dataset |
author |
Clucas, Gemma |
author_facet |
Clucas, Gemma |
author_sort |
Clucas, Gemma |
title |
Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
title_short |
Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
title_full |
Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
title_fullStr |
Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
title_full_unstemmed |
Data files associated with the manuscript, "Adaptive Genetic Variation Underlies Biocomplexity of Atlantic Cod in the Gulf of Maine and on Georges Bank." |
title_sort |
data files associated with the manuscript, "adaptive genetic variation underlies biocomplexity of atlantic cod in the gulf of maine and on georges bank." |
publisher |
figshare |
publishDate |
2019 |
url |
https://dx.doi.org/10.6084/m9.figshare.7683938.v1 https://figshare.com/articles/Data_files_associated_with_the_manuscript_Adaptive_Genetic_Variation_Underlies_Biocomplexity_of_Atlantic_Cod_in_the_Gulf_of_Maine_and_on_Georges_Bank_/7683938/1 |
genre |
atlantic cod |
genre_facet |
atlantic cod |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.7683938 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.7683938.v1 https://doi.org/10.6084/m9.figshare.7683938 |
_version_ |
1766357795531128832 |