Crassostrea gigas high-throughput bisulfite sequencing (gill tissue)
This fileset contains two files in generic feature format (GFF) of methylation-enriched high-throughput bisulfite sequencing data for Pacific oyster (Crassostrea gigas), gill tissue. The first GFF includes the location and proportion of methylation for all analyzed CpG dinucleotides with greater tha...
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Online Access: | https://dx.doi.org/10.6084/m9.figshare.749728.v8 https://figshare.com/articles/dataset/Crassostrea_gigas_high_throughput_bisulfite_sequencing_gill_tissue_/749728/8 |
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ftdatacite:10.6084/m9.figshare.749728.v8 2023-05-15T15:57:38+02:00 Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) Gavery, Mackenzie Roberts, Steven 2013 https://dx.doi.org/10.6084/m9.figshare.749728.v8 https://figshare.com/articles/dataset/Crassostrea_gigas_high_throughput_bisulfite_sequencing_gill_tissue_/749728/8 unknown figshare https://dx.doi.org/10.6084/m9.figshare.749728 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Physiology FOS Biological sciences Marine Biology 60102 Bioinformatics FOS Computer and information sciences Genetics Molecular Biology dataset Dataset 2013 ftdatacite https://doi.org/10.6084/m9.figshare.749728.v8 https://doi.org/10.6084/m9.figshare.749728 2021-11-05T12:55:41Z This fileset contains two files in generic feature format (GFF) of methylation-enriched high-throughput bisulfite sequencing data for Pacific oyster (Crassostrea gigas), gill tissue. The first GFF includes the location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage Cgigas_gill_HTbisulfiteSeq_CG_AllData.gff. The second GFF is limited to those CpG loci where the proportion of methylation is ≥ 0.5 (Cgigas_gill_HTbisulfiteSeq_CG_methylated.gff) In addition, this fileset includes the SQL queries used to derive each of the GFF files from the original methratio output. A link to the public methratio dataset, which includes the unfiltered methylation data for all cytosines covered, can be found below. Dataset Crassostrea gigas Pacific oyster DataCite Metadata Store (German National Library of Science and Technology) Pacific |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Physiology FOS Biological sciences Marine Biology 60102 Bioinformatics FOS Computer and information sciences Genetics Molecular Biology |
spellingShingle |
Physiology FOS Biological sciences Marine Biology 60102 Bioinformatics FOS Computer and information sciences Genetics Molecular Biology Gavery, Mackenzie Roberts, Steven Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
topic_facet |
Physiology FOS Biological sciences Marine Biology 60102 Bioinformatics FOS Computer and information sciences Genetics Molecular Biology |
description |
This fileset contains two files in generic feature format (GFF) of methylation-enriched high-throughput bisulfite sequencing data for Pacific oyster (Crassostrea gigas), gill tissue. The first GFF includes the location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage Cgigas_gill_HTbisulfiteSeq_CG_AllData.gff. The second GFF is limited to those CpG loci where the proportion of methylation is ≥ 0.5 (Cgigas_gill_HTbisulfiteSeq_CG_methylated.gff) In addition, this fileset includes the SQL queries used to derive each of the GFF files from the original methratio output. A link to the public methratio dataset, which includes the unfiltered methylation data for all cytosines covered, can be found below. |
format |
Dataset |
author |
Gavery, Mackenzie Roberts, Steven |
author_facet |
Gavery, Mackenzie Roberts, Steven |
author_sort |
Gavery, Mackenzie |
title |
Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
title_short |
Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
title_full |
Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
title_fullStr |
Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
title_full_unstemmed |
Crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
title_sort |
crassostrea gigas high-throughput bisulfite sequencing (gill tissue) |
publisher |
figshare |
publishDate |
2013 |
url |
https://dx.doi.org/10.6084/m9.figshare.749728.v8 https://figshare.com/articles/dataset/Crassostrea_gigas_high_throughput_bisulfite_sequencing_gill_tissue_/749728/8 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Crassostrea gigas Pacific oyster |
genre_facet |
Crassostrea gigas Pacific oyster |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.749728 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.749728.v8 https://doi.org/10.6084/m9.figshare.749728 |
_version_ |
1766393312416104448 |