Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil

Figure S1. Alignment of nucleotide sequences corresponding to adssl1a and adssl1b. Conserved nucleotides in the aligned sequences are highlighted in blue. Adssl1a and adssl1b sequences share 93% identity over 597 aligned nucleotides. The alignment and percentage identity calculation were performed u...

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Main Authors: Caballero-Solares, Albert, Xue, Xi, Parrish, Christopher, Foroutani, Maryam, Taylor, Richard, Rise, Matthew
Format: Text
Language:unknown
Published: figshare 2018
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.7295168.v1
https://springernature.figshare.com/articles/Additional_file_3_of_Changes_in_the_liver_transcriptome_of_farmed_Atlantic_salmon_Salmo_salar_fed_experimental_diets_based_on_terrestrial_alternatives_to_fish_meal_and_fish_oil/7295168/1
id ftdatacite:10.6084/m9.figshare.7295168.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.7295168.v1 2023-05-15T15:32:20+02:00 Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil Caballero-Solares, Albert Xue, Xi Parrish, Christopher Foroutani, Maryam Taylor, Richard Rise, Matthew 2018 https://dx.doi.org/10.6084/m9.figshare.7295168.v1 https://springernature.figshare.com/articles/Additional_file_3_of_Changes_in_the_liver_transcriptome_of_farmed_Atlantic_salmon_Salmo_salar_fed_experimental_diets_based_on_terrestrial_alternatives_to_fish_meal_and_fish_oil/7295168/1 unknown figshare https://dx.doi.org/10.1186/s12864-018-5188-6 https://dx.doi.org/10.6084/m9.figshare.7295168 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Biochemistry Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology 69999 Biological Sciences not elsewhere classified Inorganic Chemistry FOS Chemical sciences 110309 Infectious Diseases FOS Health sciences 60506 Virology Text article-journal Journal contribution ScholarlyArticle 2018 ftdatacite https://doi.org/10.6084/m9.figshare.7295168.v1 https://doi.org/10.1186/s12864-018-5188-6 https://doi.org/10.6084/m9.figshare.7295168 2021-11-05T12:55:41Z Figure S1. Alignment of nucleotide sequences corresponding to adssl1a and adssl1b. Conserved nucleotides in the aligned sequences are highlighted in blue. Adssl1a and adssl1b sequences share 93% identity over 597 aligned nucleotides. The alignment and percentage identity calculation were performed using AlignX (Vector NTI Advance 11). The nucleotide regions covered by probes C107R157 and C098R022 from the Agilent 44Â K salmonid microarray (GEO accession number: GPL11299) are indicated within boxes. The forward qPCR primer for adssl1a is in bold and single underlined, whereas the reverse qPCR primer is in bold and double underlined. The qPCR primers designed for adssl1b are not included in the figure as none of them passed our quality tests. (DOCX 28 kb) Text Atlantic salmon Salmo salar DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
spellingShingle Biochemistry
Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
Caballero-Solares, Albert
Xue, Xi
Parrish, Christopher
Foroutani, Maryam
Taylor, Richard
Rise, Matthew
Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
topic_facet Biochemistry
Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
110309 Infectious Diseases
FOS Health sciences
60506 Virology
description Figure S1. Alignment of nucleotide sequences corresponding to adssl1a and adssl1b. Conserved nucleotides in the aligned sequences are highlighted in blue. Adssl1a and adssl1b sequences share 93% identity over 597 aligned nucleotides. The alignment and percentage identity calculation were performed using AlignX (Vector NTI Advance 11). The nucleotide regions covered by probes C107R157 and C098R022 from the Agilent 44Â K salmonid microarray (GEO accession number: GPL11299) are indicated within boxes. The forward qPCR primer for adssl1a is in bold and single underlined, whereas the reverse qPCR primer is in bold and double underlined. The qPCR primers designed for adssl1b are not included in the figure as none of them passed our quality tests. (DOCX 28 kb)
format Text
author Caballero-Solares, Albert
Xue, Xi
Parrish, Christopher
Foroutani, Maryam
Taylor, Richard
Rise, Matthew
author_facet Caballero-Solares, Albert
Xue, Xi
Parrish, Christopher
Foroutani, Maryam
Taylor, Richard
Rise, Matthew
author_sort Caballero-Solares, Albert
title Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
title_short Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
title_full Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
title_fullStr Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
title_full_unstemmed Additional file 3: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
title_sort additional file 3: of changes in the liver transcriptome of farmed atlantic salmon (salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil
publisher figshare
publishDate 2018
url https://dx.doi.org/10.6084/m9.figshare.7295168.v1
https://springernature.figshare.com/articles/Additional_file_3_of_Changes_in_the_liver_transcriptome_of_farmed_Atlantic_salmon_Salmo_salar_fed_experimental_diets_based_on_terrestrial_alternatives_to_fish_meal_and_fish_oil/7295168/1
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://dx.doi.org/10.1186/s12864-018-5188-6
https://dx.doi.org/10.6084/m9.figshare.7295168
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.7295168.v1
https://doi.org/10.1186/s12864-018-5188-6
https://doi.org/10.6084/m9.figshare.7295168
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