The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon

Lichens are symbiotic associations consisting of a fungal (mycobiont) and one or more photosynthetic (photobionts) partners and are the dominant component, and most important primary producers, of Antarctic terrestrial ecosystems. The most common lichens in the maritime Antarctic are Usnea antarctic...

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Main Authors: Lagostina, Elisa, Grande, Francesco Dal, Andreev, Mikhail, Printzen, Christian
Format: Dataset
Language:unknown
Published: Taylor & Francis 2018
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.7261430.v1
https://tandf.figshare.com/articles/The_use_of_microsatellite_markers_for_species_delimitation_in_Antarctic_i_Usnea_i_subgenus_i_Neuropogon_i_/7261430/1
id ftdatacite:10.6084/m9.figshare.7261430.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.7261430.v1 2023-05-15T13:59:29+02:00 The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon Lagostina, Elisa Grande, Francesco Dal Andreev, Mikhail Printzen, Christian 2018 https://dx.doi.org/10.6084/m9.figshare.7261430.v1 https://tandf.figshare.com/articles/The_use_of_microsatellite_markers_for_species_delimitation_in_Antarctic_i_Usnea_i_subgenus_i_Neuropogon_i_/7261430/1 unknown Taylor & Francis https://dx.doi.org/10.1080/00275514.2018.1512304 https://dx.doi.org/10.6084/m9.figshare.7261430 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Genetics FOS Biological sciences Evolutionary Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology Marine Biology Inorganic Chemistry FOS Chemical sciences Plant Biology dataset Dataset 2018 ftdatacite https://doi.org/10.6084/m9.figshare.7261430.v1 https://doi.org/10.1080/00275514.2018.1512304 https://doi.org/10.6084/m9.figshare.7261430 2021-11-05T12:55:41Z Lichens are symbiotic associations consisting of a fungal (mycobiont) and one or more photosynthetic (photobionts) partners and are the dominant component, and most important primary producers, of Antarctic terrestrial ecosystems. The most common lichens in the maritime Antarctic are Usnea antarctica and U. aurantiacoatra , a so-called “species pair” in which U. antarctica shows asexual reproduction and propagation via soredia and U. aurantiacoatra forms ascospores in apothecia. Previous molecular analyses were not able to unambiguously distinguish the two morphotypes as species. Therefore, the goal of this study was to find out whether fast-evolving SSR (single sequence repeat) markers are able to separate morphotypes more clearly and help to clarify their taxonomy. We investigate 190 individuals from five mixed stands of both morphotypes collected in King George Island and Elephant Island (South Shetland Islands, Antarctica). Based on 23 microsatellite markers designed from sequenced genomes, discriminant analysis of principal components (DAPC), Bayesian clustering analysis, and coalescent-based estimation of gene flow show clear evidence for the existence of two different species distinguishable by reproductive mode. We did not detect any statistical association between genetic clusters and three previously reported chemical races of each species. Dataset Antarc* Antarctic Antarctica Elephant Island King George Island South Shetland Islands Usnea antarctica DataCite Metadata Store (German National Library of Science and Technology) Antarctic King George Island South Shetland Islands Elephant Island ENVELOPE(-55.184,-55.184,-61.085,-61.085)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Marine Biology
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
spellingShingle Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Marine Biology
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
Lagostina, Elisa
Grande, Francesco Dal
Andreev, Mikhail
Printzen, Christian
The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
topic_facet Genetics
FOS Biological sciences
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Marine Biology
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
description Lichens are symbiotic associations consisting of a fungal (mycobiont) and one or more photosynthetic (photobionts) partners and are the dominant component, and most important primary producers, of Antarctic terrestrial ecosystems. The most common lichens in the maritime Antarctic are Usnea antarctica and U. aurantiacoatra , a so-called “species pair” in which U. antarctica shows asexual reproduction and propagation via soredia and U. aurantiacoatra forms ascospores in apothecia. Previous molecular analyses were not able to unambiguously distinguish the two morphotypes as species. Therefore, the goal of this study was to find out whether fast-evolving SSR (single sequence repeat) markers are able to separate morphotypes more clearly and help to clarify their taxonomy. We investigate 190 individuals from five mixed stands of both morphotypes collected in King George Island and Elephant Island (South Shetland Islands, Antarctica). Based on 23 microsatellite markers designed from sequenced genomes, discriminant analysis of principal components (DAPC), Bayesian clustering analysis, and coalescent-based estimation of gene flow show clear evidence for the existence of two different species distinguishable by reproductive mode. We did not detect any statistical association between genetic clusters and three previously reported chemical races of each species.
format Dataset
author Lagostina, Elisa
Grande, Francesco Dal
Andreev, Mikhail
Printzen, Christian
author_facet Lagostina, Elisa
Grande, Francesco Dal
Andreev, Mikhail
Printzen, Christian
author_sort Lagostina, Elisa
title The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
title_short The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
title_full The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
title_fullStr The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
title_full_unstemmed The use of microsatellite markers for species delimitation in Antarctic Usnea subgenus Neuropogon
title_sort use of microsatellite markers for species delimitation in antarctic usnea subgenus neuropogon
publisher Taylor & Francis
publishDate 2018
url https://dx.doi.org/10.6084/m9.figshare.7261430.v1
https://tandf.figshare.com/articles/The_use_of_microsatellite_markers_for_species_delimitation_in_Antarctic_i_Usnea_i_subgenus_i_Neuropogon_i_/7261430/1
long_lat ENVELOPE(-55.184,-55.184,-61.085,-61.085)
geographic Antarctic
King George Island
South Shetland Islands
Elephant Island
geographic_facet Antarctic
King George Island
South Shetland Islands
Elephant Island
genre Antarc*
Antarctic
Antarctica
Elephant Island
King George Island
South Shetland Islands
Usnea antarctica
genre_facet Antarc*
Antarctic
Antarctica
Elephant Island
King George Island
South Shetland Islands
Usnea antarctica
op_relation https://dx.doi.org/10.1080/00275514.2018.1512304
https://dx.doi.org/10.6084/m9.figshare.7261430
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.7261430.v1
https://doi.org/10.1080/00275514.2018.1512304
https://doi.org/10.6084/m9.figshare.7261430
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