Ocean Acidification Affects the Oyster Proteome

• Main Author: Timmins-Schiffman, Emma
• Format: Dataset
• Language: unknown
• Published: figshare 2013
• Subjects: Physiology; FOS Biological sciences; Molecular Biology; 60102 Bioinformatics; FOS Computer and information sciences; Marine Biology; Pacific; Ocean acidification
• Online Access: https://dx.doi.org/10.6084/m9.figshare.654051.v1; https://figshare.com/articles/dataset/Ocean_Acidification_Affects_the_Oyster_Proteome/654051/1

This fileset includes data demonstrating the effects of exposure to high pCO2 (low pH) on global protein expression (the proteome) in Pacific oysters. Included are the expression data (from Skyline) for each protein averaged within treatment groups (high and low pCO2) with SwissProt ID annotations; a blastp result file associating oyster protein IDs (CGI #s) with KEGG pathway IDs; the input file for iPath to show differential expression between low and high pCO2; and 2 iPath outputs showing pathways identified in the entire oyster proteome as well as pathways that are differentially expressed in the gill at high and low pCO2. Below is a link to the prezi that adds further explanation.