DNA methylation coverage in two tissues of the Pacific Oyster
This work aims at characterizing and comparing DNA methylation in two tissues in the Pacific oyster using the methylKit R package. Bisulfite sequencing was used to examine genome-wide DNA methylation in the oyster gonad tissue and MBD-Seq was used to examine methylation in the gill tissue. The R scr...
Main Authors: | , , |
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Format: | Dataset |
Language: | unknown |
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figshare
2013
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Online Access: | https://dx.doi.org/10.6084/m9.figshare.652964.v1 https://figshare.com/articles/dataset/DNA_methylation_coverage_in_two_tissues_of_the_Pacific_Oyster/652964/1 |
Summary: | This work aims at characterizing and comparing DNA methylation in two tissues in the Pacific oyster using the methylKit R package. Bisulfite sequencing was used to examine genome-wide DNA methylation in the oyster gonad tissue and MBD-Seq was used to examine methylation in the gill tissue. The R script used for these analyses has been provided along with some visualization outputs comparing gill and gonad tissue from the Pacific oyster. |
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