A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information
S1 File. Atlantic cod gadMor2.1 genome assembly. S2 File. The position and the flanking sequences of the nine sex-specific SNPs on LG11 that is heterozygous in all 49 males and homozygous in all 53 females of Atlantic cod. S3 File. The X-sequence and the Y- sequence, including codzkY, in the gadMor2...
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ftdatacite:10.6084/m9.figshare.6236441 2023-05-15T15:26:18+02:00 A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information Graceline Tina Kirubakaran 2018 https://dx.doi.org/10.6084/m9.figshare.6236441 https://figshare.com/articles/A_zinc_knuckle_gene_on_the_Y_chromosome_zkY_determines_sex_in_Atlantic_cod_Gadus_morhua_-_Supporting_information/6236441 unknown figshare Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY 60102 Bioinformatics FOS Computer and information sciences dataset Dataset 2018 ftdatacite https://doi.org/10.6084/m9.figshare.6236441 2021-11-05T12:55:41Z S1 File. Atlantic cod gadMor2.1 genome assembly. S2 File. The position and the flanking sequences of the nine sex-specific SNPs on LG11 that is heterozygous in all 49 males and homozygous in all 53 females of Atlantic cod. S3 File. The X-sequence and the Y- sequence, including codzkY, in the gadMor2.1 assembly. S4 File. Oxford nanopore sequences of Atlantic cod that aligned to the X- and Y- sequences in the gadMor2.1 assembly. S5 Table. The position of the eight autosomal gene copies of cod zkY in gadMor2.1 assembly. S6 File. MAFFT alignments of cod zkY and the eight autosomal copies in Atlantic cod. S7 File. MAFFT alignments of the Atlantic cod Y-sequence with other gadoids. S8 File. MAFFT alignments of the Atlantic cod X-sequence with other gadoids. S9 File. 102 samples ids, sex and ENA accession id. S10a and S10b File. The long-range miseq illumina data. Dataset atlantic cod Gadus morhua DataCite Metadata Store (German National Library of Science and Technology) The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
60102 Bioinformatics FOS Computer and information sciences |
spellingShingle |
60102 Bioinformatics FOS Computer and information sciences Graceline Tina Kirubakaran A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
topic_facet |
60102 Bioinformatics FOS Computer and information sciences |
description |
S1 File. Atlantic cod gadMor2.1 genome assembly. S2 File. The position and the flanking sequences of the nine sex-specific SNPs on LG11 that is heterozygous in all 49 males and homozygous in all 53 females of Atlantic cod. S3 File. The X-sequence and the Y- sequence, including codzkY, in the gadMor2.1 assembly. S4 File. Oxford nanopore sequences of Atlantic cod that aligned to the X- and Y- sequences in the gadMor2.1 assembly. S5 Table. The position of the eight autosomal gene copies of cod zkY in gadMor2.1 assembly. S6 File. MAFFT alignments of cod zkY and the eight autosomal copies in Atlantic cod. S7 File. MAFFT alignments of the Atlantic cod Y-sequence with other gadoids. S8 File. MAFFT alignments of the Atlantic cod X-sequence with other gadoids. S9 File. 102 samples ids, sex and ENA accession id. S10a and S10b File. The long-range miseq illumina data. |
format |
Dataset |
author |
Graceline Tina Kirubakaran |
author_facet |
Graceline Tina Kirubakaran |
author_sort |
Graceline Tina Kirubakaran |
title |
A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
title_short |
A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
title_full |
A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
title_fullStr |
A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
title_full_unstemmed |
A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information |
title_sort |
zinc knuckle gene on the y chromosome (zky) determines sex in atlantic cod (gadus morhua) - supporting information |
publisher |
figshare |
publishDate |
2018 |
url |
https://dx.doi.org/10.6084/m9.figshare.6236441 https://figshare.com/articles/A_zinc_knuckle_gene_on_the_Y_chromosome_zkY_determines_sex_in_Atlantic_cod_Gadus_morhua_-_Supporting_information/6236441 |
long_lat |
ENVELOPE(-112.453,-112.453,57.591,57.591) |
geographic |
The ''Y'' |
geographic_facet |
The ''Y'' |
genre |
atlantic cod Gadus morhua |
genre_facet |
atlantic cod Gadus morhua |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.6236441 |
_version_ |
1766356813658193920 |