Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events

Topological analysis of seven different species. a Possible scenarios and alternative topologies after a duplication. Topology A (TA): After the duplication, both sides maintain gene copies in at least one species of set species 1 and set species 2. TB: One of the sides lost all of set species 2. TC...

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Main Authors: Julca, Irene, Marcet-Houben, Marina, Vargas, Pablo, Gabaldรณn, Toni
Format: Still Image
Language:unknown
Published: figshare 2018
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.5827158
https://springernature.figshare.com/articles/Additional_file_4_Figure_S3_of_Phylogenomics_of_the_olive_tree_Olea_europaea_reveals_the_relative_contribution_of_ancient_allo-_and_autopolyploidization_events/5827158
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author Julca, Irene
Marcet-Houben, Marina
Vargas, Pablo
Gabaldรณn, Toni
author_facet Julca, Irene
Marcet-Houben, Marina
Vargas, Pablo
Gabaldรณn, Toni
author_sort Julca, Irene
collection DataCite
description Topological analysis of seven different species. a Possible scenarios and alternative topologies after a duplication. Topology A (TA): After the duplication, both sides maintain gene copies in at least one species of set species 1 and set species 2. TB: One of the sides lost all of set species 2. TC: One of the sides lost all of set species 1. b Pie charts representing the distribution of gene trees supporting each of the different topologies for the phylomes of Phaseolus vulgaris (bean), Solanum commersonii (wild potato), Scophthalmus maximus (fishes), and Rhizopus delemar (Mucoromycotina), taken from PhylomeDB. c Percentage of gene trees supporting each topology for the phylomes of U. gibba, S. miltiorrhiza, and M. guttatus. (TIFF 854 kb)
format Still Image
genre Scophthalmus maximus
genre_facet Scophthalmus maximus
geographic Allo
Gibba
geographic_facet Allo
Gibba
id ftdatacite:10.6084/m9.figshare.5827158
institution Open Polar
language unknown
long_lat ENVELOPE(-61.800,-61.800,-63.967,-63.967)
ENVELOPE(6.000,6.000,62.567,62.567)
op_collection_id ftdatacite
op_doi https://doi.org/10.6084/m9.figshare.5827158
https://doi.org/10.1186/s12915-018-0482-y
op_relation https://dx.doi.org/10.1186/s12915-018-0482-y
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
publishDate 2018
publisher figshare
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.5827158 2025-01-17T00:41:14+00:00 Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events Julca, Irene Marcet-Houben, Marina Vargas, Pablo Gabaldรณn, Toni 2018 https://dx.doi.org/10.6084/m9.figshare.5827158 https://springernature.figshare.com/articles/Additional_file_4_Figure_S3_of_Phylogenomics_of_the_olive_tree_Olea_europaea_reveals_the_relative_contribution_of_ancient_allo-_and_autopolyploidization_events/5827158 unknown figshare https://dx.doi.org/10.1186/s12915-018-0482-y Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Genetics Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Developmental Biology Computational Biology Image Figure graphic ImageObject 2018 ftdatacite https://doi.org/10.6084/m9.figshare.5827158 https://doi.org/10.1186/s12915-018-0482-y 2021-11-05T12:55:41Z Topological analysis of seven different species. a Possible scenarios and alternative topologies after a duplication. Topology A (TA): After the duplication, both sides maintain gene copies in at least one species of set species 1 and set species 2. TB: One of the sides lost all of set species 2. TC: One of the sides lost all of set species 1. b Pie charts representing the distribution of gene trees supporting each of the different topologies for the phylomes of Phaseolus vulgaris (bean), Solanum commersonii (wild potato), Scophthalmus maximus (fishes), and Rhizopus delemar (Mucoromycotina), taken from PhylomeDB. c Percentage of gene trees supporting each topology for the phylomes of U. gibba, S. miltiorrhiza, and M. guttatus. (TIFF 854 kb) Still Image Scophthalmus maximus DataCite Allo ENVELOPE(-61.800,-61.800,-63.967,-63.967) Gibba ENVELOPE(6.000,6.000,62.567,62.567)
spellingShingle Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Developmental Biology
Computational Biology
Julca, Irene
Marcet-Houben, Marina
Vargas, Pablo
Gabaldรณn, Toni
Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title_full Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title_fullStr Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title_full_unstemmed Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title_short Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
title_sort additional file 4: figure s3. of phylogenomics of the olive tree (olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
topic Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Developmental Biology
Computational Biology
topic_facet Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Developmental Biology
Computational Biology
url https://dx.doi.org/10.6084/m9.figshare.5827158
https://springernature.figshare.com/articles/Additional_file_4_Figure_S3_of_Phylogenomics_of_the_olive_tree_Olea_europaea_reveals_the_relative_contribution_of_ancient_allo-_and_autopolyploidization_events/5827158