Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

Comparison of full-length transcript reconstruction between the four current assemblies and three previously published transcriptomes; Magnanou et al.â s Arctic charr assembly [34], and the PhyloFish DB brown trout and European whitefish assemblies [35]. Cumulative number of unique matching proteins...

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Main Authors: Carruthers, Madeleine, Yurchenko, Andrey, Augley, Julian, Adams, Colin, Herzyk, Pawel, Elmer, Kathryn
Format: Text
Language:unknown
Published: figshare 2018
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.5769027
https://springernature.figshare.com/articles/Additional_file_5_Figure_S1_of_De_novo_transcriptome_assembly_annotation_and_comparison_of_four_ecological_and_evolutionary_model_salmonid_fish_species/5769027
id ftdatacite:10.6084/m9.figshare.5769027
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spelling ftdatacite:10.6084/m9.figshare.5769027 2023-05-15T14:29:50+02:00 Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species Carruthers, Madeleine Yurchenko, Andrey Augley, Julian Adams, Colin Herzyk, Pawel Elmer, Kathryn 2018 https://dx.doi.org/10.6084/m9.figshare.5769027 https://springernature.figshare.com/articles/Additional_file_5_Figure_S1_of_De_novo_transcriptome_assembly_annotation_and_comparison_of_four_ecological_and_evolutionary_model_salmonid_fish_species/5769027 unknown figshare https://dx.doi.org/10.1186/s12864-017-4379-x Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Cell Biology Genetics FOS Biological sciences Ecology 69999 Biological Sciences not elsewhere classified Inorganic Chemistry FOS Chemical sciences Plant Biology Text article-journal Journal contribution ScholarlyArticle 2018 ftdatacite https://doi.org/10.6084/m9.figshare.5769027 https://doi.org/10.1186/s12864-017-4379-x 2021-11-05T12:55:41Z Comparison of full-length transcript reconstruction between the four current assemblies and three previously published transcriptomes; Magnanou et al.â s Arctic charr assembly [34], and the PhyloFish DB brown trout and European whitefish assemblies [35]. Cumulative number of unique matching proteins that aligned to the NCBI protein database for Atlantic salmon (GCF_000233375.1) at a given coverage: Atlantic salmon (yellow), brown trout (green), Arctic charr (blue), European whitefish (red), Magnanou et al. Arctic charr transcriptome (black), PhyloFish brown trout (dark grey), and PhyloFish European whitefish (light grey). (PDF 35Â kb) Text Arctic charr Arctic Atlantic salmon DataCite Metadata Store (German National Library of Science and Technology) Arctic
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Cell Biology
Genetics
FOS Biological sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
spellingShingle Cell Biology
Genetics
FOS Biological sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
Carruthers, Madeleine
Yurchenko, Andrey
Augley, Julian
Adams, Colin
Herzyk, Pawel
Elmer, Kathryn
Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
topic_facet Cell Biology
Genetics
FOS Biological sciences
Ecology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
Plant Biology
description Comparison of full-length transcript reconstruction between the four current assemblies and three previously published transcriptomes; Magnanou et al.â s Arctic charr assembly [34], and the PhyloFish DB brown trout and European whitefish assemblies [35]. Cumulative number of unique matching proteins that aligned to the NCBI protein database for Atlantic salmon (GCF_000233375.1) at a given coverage: Atlantic salmon (yellow), brown trout (green), Arctic charr (blue), European whitefish (red), Magnanou et al. Arctic charr transcriptome (black), PhyloFish brown trout (dark grey), and PhyloFish European whitefish (light grey). (PDF 35Â kb)
format Text
author Carruthers, Madeleine
Yurchenko, Andrey
Augley, Julian
Adams, Colin
Herzyk, Pawel
Elmer, Kathryn
author_facet Carruthers, Madeleine
Yurchenko, Andrey
Augley, Julian
Adams, Colin
Herzyk, Pawel
Elmer, Kathryn
author_sort Carruthers, Madeleine
title Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
title_short Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
title_full Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
title_fullStr Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
title_full_unstemmed Additional file 5: Figure S1. of De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
title_sort additional file 5: figure s1. of de novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species
publisher figshare
publishDate 2018
url https://dx.doi.org/10.6084/m9.figshare.5769027
https://springernature.figshare.com/articles/Additional_file_5_Figure_S1_of_De_novo_transcriptome_assembly_annotation_and_comparison_of_four_ecological_and_evolutionary_model_salmonid_fish_species/5769027
geographic Arctic
geographic_facet Arctic
genre Arctic charr
Arctic
Atlantic salmon
genre_facet Arctic charr
Arctic
Atlantic salmon
op_relation https://dx.doi.org/10.1186/s12864-017-4379-x
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.5769027
https://doi.org/10.1186/s12864-017-4379-x
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