Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model.
File List script.R (MD5: 57da87fd1e041a03add66cc2af0c8933) constraints.MCMC.R (MD5: c52c9d7c30dcb95fae66d473cc4b25e1) update.mu.cpp (MD5: 8a3185afcf71659dbcfbd21be73a14f2) workspace.Rdata (MD5: 7bd75c148d65bf52ef058b182672fe2b) seal.csv (MD5: 4e8a85f13486610fbab515c2fa04bef9) Description script.R co...
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ftdatacite:10.6084/m9.figshare.3563076 2023-05-15T16:33:04+02:00 Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. Brost, Brian M. Mevin B. Hooten Hanks, Ephraim M. Small, Robert J. 2016 https://dx.doi.org/10.6084/m9.figshare.3563076 https://wiley.figshare.com/articles/dataset/Supplement_1_Source_code_and_data_for_implementing_the_MCMC_algorithm_for_the_mixture_t_model_/3563076 unknown Wiley https://dx.doi.org/10.1890/15-0472.1 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 CC0 Environmental Science Ecology FOS Biological sciences dataset Dataset 2016 ftdatacite https://doi.org/10.6084/m9.figshare.3563076 https://doi.org/10.1890/15-0472.1 2021-11-05T12:55:41Z File List script.R (MD5: 57da87fd1e041a03add66cc2af0c8933) constraints.MCMC.R (MD5: c52c9d7c30dcb95fae66d473cc4b25e1) update.mu.cpp (MD5: 8a3185afcf71659dbcfbd21be73a14f2) workspace.Rdata (MD5: 7bd75c148d65bf52ef058b182672fe2b) seal.csv (MD5: 4e8a85f13486610fbab515c2fa04bef9) Description script.R contains R code for loading the data (workspace.Rdata), necessary R packages, subroutines (update.mu.cpp), and MCMC algorithm for model fitting (constraints.MCMC.R); simulating data; fitting the model to simulated data and examining the associated results; and fitting the model to the harbor seal telemetry data used in the case study and examining the associated results. constraints.MCMC.R contains code to implement the MCMC algorithm for model fitting as outlined in Appendix B. update.mu.cpp contains optional C++ code for updating -- IMAGE: Please see in attached file. -- in the MCMC algorithm. Use argument Cpp=TRUE to the constraints.MCMC function to implement this C++ routine. workspace.Rdata contains raster data representing the support of -- IMAGE: Please see in attached file. --, bathymetry, and distance to haul-out site; a design matrix of spatially-reference habitat covariates for the resource selection function; and a spatial object containing the Argos telemetry locations of the harbor seal used in our case study. seal.csv contains the x - and y -coordinates of the telemetry locations for the harbor seal used in our case study (in Albers equal area projection), as well as the associated dates, times, and Argos location classes. Dataset harbor seal DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Environmental Science Ecology FOS Biological sciences |
spellingShingle |
Environmental Science Ecology FOS Biological sciences Brost, Brian M. Mevin B. Hooten Hanks, Ephraim M. Small, Robert J. Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
topic_facet |
Environmental Science Ecology FOS Biological sciences |
description |
File List script.R (MD5: 57da87fd1e041a03add66cc2af0c8933) constraints.MCMC.R (MD5: c52c9d7c30dcb95fae66d473cc4b25e1) update.mu.cpp (MD5: 8a3185afcf71659dbcfbd21be73a14f2) workspace.Rdata (MD5: 7bd75c148d65bf52ef058b182672fe2b) seal.csv (MD5: 4e8a85f13486610fbab515c2fa04bef9) Description script.R contains R code for loading the data (workspace.Rdata), necessary R packages, subroutines (update.mu.cpp), and MCMC algorithm for model fitting (constraints.MCMC.R); simulating data; fitting the model to simulated data and examining the associated results; and fitting the model to the harbor seal telemetry data used in the case study and examining the associated results. constraints.MCMC.R contains code to implement the MCMC algorithm for model fitting as outlined in Appendix B. update.mu.cpp contains optional C++ code for updating -- IMAGE: Please see in attached file. -- in the MCMC algorithm. Use argument Cpp=TRUE to the constraints.MCMC function to implement this C++ routine. workspace.Rdata contains raster data representing the support of -- IMAGE: Please see in attached file. --, bathymetry, and distance to haul-out site; a design matrix of spatially-reference habitat covariates for the resource selection function; and a spatial object containing the Argos telemetry locations of the harbor seal used in our case study. seal.csv contains the x - and y -coordinates of the telemetry locations for the harbor seal used in our case study (in Albers equal area projection), as well as the associated dates, times, and Argos location classes. |
format |
Dataset |
author |
Brost, Brian M. Mevin B. Hooten Hanks, Ephraim M. Small, Robert J. |
author_facet |
Brost, Brian M. Mevin B. Hooten Hanks, Ephraim M. Small, Robert J. |
author_sort |
Brost, Brian M. |
title |
Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
title_short |
Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
title_full |
Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
title_fullStr |
Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
title_full_unstemmed |
Supplement 1. Source code and data for implementing the MCMC algorithm for the mixture t model. |
title_sort |
supplement 1. source code and data for implementing the mcmc algorithm for the mixture t model. |
publisher |
Wiley |
publishDate |
2016 |
url |
https://dx.doi.org/10.6084/m9.figshare.3563076 https://wiley.figshare.com/articles/dataset/Supplement_1_Source_code_and_data_for_implementing_the_MCMC_algorithm_for_the_mixture_t_model_/3563076 |
genre |
harbor seal |
genre_facet |
harbor seal |
op_relation |
https://dx.doi.org/10.1890/15-0472.1 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_rightsnorm |
CC0 |
op_doi |
https://doi.org/10.6084/m9.figshare.3563076 https://doi.org/10.1890/15-0472.1 |
_version_ |
1766022780552216576 |