Transcript and genome assemblies of Atlantic cod
NEWB454: An assembly based on 454 sequencing reads and sequenced BAC-ends. Assembled with Newbler 3.0. CA454ILM: An assembly based on Illumina and 454 sequencing reads. Assembled with Celera Assembler. CA454PB: An assembly based on Illumina, 454 and PacBio sequencing reads. Assembled with Celera Ass...
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ftdatacite:10.6084/m9.figshare.3408247.v2 2023-05-15T15:27:23+02:00 Transcript and genome assemblies of Atlantic cod Tørresen, Ole K. Nederbragt, Lex 2016 https://dx.doi.org/10.6084/m9.figshare.3408247.v2 https://figshare.com/articles/dataset/Transcript_and_genome_assemblies_of_Atlantic_cod/3408247/2 unknown figshare https://dx.doi.org/10.6084/m9.figshare.3408247 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY 60102 Bioinformatics FOS Computer and information sciences dataset Dataset 2016 ftdatacite https://doi.org/10.6084/m9.figshare.3408247.v2 https://doi.org/10.6084/m9.figshare.3408247 2021-11-05T12:55:41Z NEWB454: An assembly based on 454 sequencing reads and sequenced BAC-ends. Assembled with Newbler 3.0. CA454ILM: An assembly based on Illumina and 454 sequencing reads. Assembled with Celera Assembler. CA454PB: An assembly based on Illumina, 454 and PacBio sequencing reads. Assembled with Celera Assembler. ALPILM: An assembly based on Illumina reads. Assembled with ALLPATHS-LG. gadMor2: An assembly reconciliation of NEWB454, ALPILM, CA454PB, CA454ILM put into linkage groups. trinity_cod_rna: A Trinity assembly of Illumina RNA reads from 10.1016/j.redox.2015.06.003. newbler_cod_rna: A Newbler assembly of 454 and Sanger reads from 10.1038/nature10342 and Sanger reads from 10.1186/1471-2164-13-443. isoseq_cod_rna: A IsoSeq clustering of PacBio RNA reads.te_comprehensive_cod_replib: The repeat library used for annotation TEs. Dataset atlantic cod DataCite Metadata Store (German National Library of Science and Technology) |
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DataCite Metadata Store (German National Library of Science and Technology) |
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language |
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topic |
60102 Bioinformatics FOS Computer and information sciences |
spellingShingle |
60102 Bioinformatics FOS Computer and information sciences Tørresen, Ole K. Nederbragt, Lex Transcript and genome assemblies of Atlantic cod |
topic_facet |
60102 Bioinformatics FOS Computer and information sciences |
description |
NEWB454: An assembly based on 454 sequencing reads and sequenced BAC-ends. Assembled with Newbler 3.0. CA454ILM: An assembly based on Illumina and 454 sequencing reads. Assembled with Celera Assembler. CA454PB: An assembly based on Illumina, 454 and PacBio sequencing reads. Assembled with Celera Assembler. ALPILM: An assembly based on Illumina reads. Assembled with ALLPATHS-LG. gadMor2: An assembly reconciliation of NEWB454, ALPILM, CA454PB, CA454ILM put into linkage groups. trinity_cod_rna: A Trinity assembly of Illumina RNA reads from 10.1016/j.redox.2015.06.003. newbler_cod_rna: A Newbler assembly of 454 and Sanger reads from 10.1038/nature10342 and Sanger reads from 10.1186/1471-2164-13-443. isoseq_cod_rna: A IsoSeq clustering of PacBio RNA reads.te_comprehensive_cod_replib: The repeat library used for annotation TEs. |
format |
Dataset |
author |
Tørresen, Ole K. Nederbragt, Lex |
author_facet |
Tørresen, Ole K. Nederbragt, Lex |
author_sort |
Tørresen, Ole K. |
title |
Transcript and genome assemblies of Atlantic cod |
title_short |
Transcript and genome assemblies of Atlantic cod |
title_full |
Transcript and genome assemblies of Atlantic cod |
title_fullStr |
Transcript and genome assemblies of Atlantic cod |
title_full_unstemmed |
Transcript and genome assemblies of Atlantic cod |
title_sort |
transcript and genome assemblies of atlantic cod |
publisher |
figshare |
publishDate |
2016 |
url |
https://dx.doi.org/10.6084/m9.figshare.3408247.v2 https://figshare.com/articles/dataset/Transcript_and_genome_assemblies_of_Atlantic_cod/3408247/2 |
genre |
atlantic cod |
genre_facet |
atlantic cod |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.3408247 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.3408247.v2 https://doi.org/10.6084/m9.figshare.3408247 |
_version_ |
1766357834221486080 |