SNPs data of 13 fish species ...

This file includes 45 million nonredundant SNP data for 13 fish species (Asian swamp eel (Monopterus albus), Atlantic salmon (Salmo salar), barramundi (Lates calcarifer), channel catfish (Ictalurus punctatus), common carp (Cyprinus carpio), grass carp (Ctenopharyngodon idella), large scale loach (Pa...

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Bibliographic Details
Main Authors: Zhang, Lei, Li, Heng, Shi, Mijuan, Ren, Keyi, Zhang, Wanting, Cheng, Yingyin, Wang, Yaping, Xia, Xiao-Qin
Format: Dataset
Language:unknown
Published: figshare 2024
Subjects:
Genetics
FOS Biological sciences
Genomics
Bioinformatics
FOS Computer and information sciences
Atlantic salmon
Salmo salar
Online Access:https://dx.doi.org/10.6084/m9.figshare.25143119.v1
https://springernature.figshare.com/articles/dataset/SNPs_data_of_13_fish_species/25143119/1
Description
Summary:This file includes 45 million nonredundant SNP data for 13 fish species (Asian swamp eel (Monopterus albus), Atlantic salmon (Salmo salar), barramundi (Lates calcarifer), channel catfish (Ictalurus punctatus), common carp (Cyprinus carpio), grass carp (Ctenopharyngodon idella), large scale loach (Paramisgurnus dabryanus), Nile tilapia (Oreochromis niloticus), rainbow trout (Oncorhynchus mykiss), rohu labeo (Labeo rohita), silver carp (Hypophthalmichthys molitrix), snakehead (Channa argus), yellow catfish (Tachysurus fulvidraco)), with 30 million of those being high-quality SNPs that passed population testing (the Mendelian segregation ratio test or Hardy-Weinberg equilibrium test). We clloected SNPs from articles and mapped them to different genome versions, this compressed files inclued 13 folders named fish species, and there are SNPs data, unmapping data and md5 check file in each folder. ...

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