Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...

Additional file 1: Table S1. Viromic statistics and viral concentrations of four samples. Table S2. Comparison in virus recovery from short- and long-read assemblies. Table S3. Size summary of vOTUs from CB17. The two assembly types (i.e., short+long-read assembly and short-read-only assesmbly) had...

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Main Authors: Zhong, Zhi-Ping, Vik, Dean, Rapp, Josephine Z., Zablocki, Olivier, Maughan, Heather, Temperton, Ben, Deming, Jody W., Sullivan, Matthew B.
Format: Dataset
Language:unknown
Published: figshare 2023
Subjects:
Ice
Online Access:https://dx.doi.org/10.6084/m9.figshare.24586023.v1
https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Lower_viral_evolutionary_pressure_under_stable_versus_fluctuating_conditions_in_subzero_Arctic_brines/24586023/1
id ftdatacite:10.6084/m9.figshare.24586023.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.24586023.v1 2023-12-31T10:03:54+01:00 Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ... Zhong, Zhi-Ping Vik, Dean Rapp, Josephine Z. Zablocki, Olivier Maughan, Heather Temperton, Ben Deming, Jody W. Sullivan, Matthew B. 2023 https://dx.doi.org/10.6084/m9.figshare.24586023.v1 https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Lower_viral_evolutionary_pressure_under_stable_versus_fluctuating_conditions_in_subzero_Arctic_brines/24586023/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.24586023 https://dx.doi.org/10.1186/s40168-023-01619-6 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Genetics FOS Biological sciences Dataset dataset 2023 ftdatacite https://doi.org/10.6084/m9.figshare.24586023.v110.6084/m9.figshare.2458602310.1186/s40168-023-01619-6 2023-12-01T11:18:16Z Additional file 1: Table S1. Viromic statistics and viral concentrations of four samples. Table S2. Comparison in virus recovery from short- and long-read assemblies. Table S3. Size summary of vOTUs from CB17. The two assembly types (i.e., short+long-read assembly and short-read-only assesmbly) had identical sequencing depth, as described in Table S2. Table S4. Size summary of vOTUs from CB18. The two assembly types (i.e., short+long-read assembly and short-read-only assesmbly) had identical sequencing depth, as described in Table S2. Table S5. Taxonomic assignments and viral cluster summary. Viruses from this study, the NCBI RefSeq database, and 250 environmental metagenomes were included for clustering analysis. The environmental metagenomes included samples from below ecosystems: global oceans (GOV2 dataset), deep ocean water, deep ocean sediment, surfacer layer (top 1 meter) of permafrost (IsoGenie), soil, air, glacier cryoconite, glacier ice core, and lake water. Table S6. Viral cluster summary of the ... Dataset Arctic Ice ice core permafrost DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Genetics
FOS Biological sciences
spellingShingle Genetics
FOS Biological sciences
Zhong, Zhi-Ping
Vik, Dean
Rapp, Josephine Z.
Zablocki, Olivier
Maughan, Heather
Temperton, Ben
Deming, Jody W.
Sullivan, Matthew B.
Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
topic_facet Genetics
FOS Biological sciences
description Additional file 1: Table S1. Viromic statistics and viral concentrations of four samples. Table S2. Comparison in virus recovery from short- and long-read assemblies. Table S3. Size summary of vOTUs from CB17. The two assembly types (i.e., short+long-read assembly and short-read-only assesmbly) had identical sequencing depth, as described in Table S2. Table S4. Size summary of vOTUs from CB18. The two assembly types (i.e., short+long-read assembly and short-read-only assesmbly) had identical sequencing depth, as described in Table S2. Table S5. Taxonomic assignments and viral cluster summary. Viruses from this study, the NCBI RefSeq database, and 250 environmental metagenomes were included for clustering analysis. The environmental metagenomes included samples from below ecosystems: global oceans (GOV2 dataset), deep ocean water, deep ocean sediment, surfacer layer (top 1 meter) of permafrost (IsoGenie), soil, air, glacier cryoconite, glacier ice core, and lake water. Table S6. Viral cluster summary of the ...
format Dataset
author Zhong, Zhi-Ping
Vik, Dean
Rapp, Josephine Z.
Zablocki, Olivier
Maughan, Heather
Temperton, Ben
Deming, Jody W.
Sullivan, Matthew B.
author_facet Zhong, Zhi-Ping
Vik, Dean
Rapp, Josephine Z.
Zablocki, Olivier
Maughan, Heather
Temperton, Ben
Deming, Jody W.
Sullivan, Matthew B.
author_sort Zhong, Zhi-Ping
title Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
title_short Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
title_full Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
title_fullStr Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
title_full_unstemmed Additional file 1 of Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines ...
title_sort additional file 1 of lower viral evolutionary pressure under stable versus fluctuating conditions in subzero arctic brines ...
publisher figshare
publishDate 2023
url https://dx.doi.org/10.6084/m9.figshare.24586023.v1
https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Lower_viral_evolutionary_pressure_under_stable_versus_fluctuating_conditions_in_subzero_Arctic_brines/24586023/1
genre Arctic
Ice
ice core
permafrost
genre_facet Arctic
Ice
ice core
permafrost
op_relation https://dx.doi.org/10.6084/m9.figshare.24586023
https://dx.doi.org/10.1186/s40168-023-01619-6
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.6084/m9.figshare.24586023.v110.6084/m9.figshare.2458602310.1186/s40168-023-01619-6
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