Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ...
Additional file 5: Supplementary Figure 5. Heatmap of shared KEGG transporter proteins. All metatranscriptomes are shown in triplicates. Zscaling of normalized transcript counts by rows and Euclidian clustering by row and column. The presence of proteins in metaproteomes is defined by their presence...
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ftdatacite:10.6084/m9.figshare.23993331.v1 2023-10-01T03:59:35+02:00 Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... Debeljak, Pavla Bayer, Barbara Sun, Ying Herndl, Gerhard J. Obernosterer, Ingrid 2023 https://dx.doi.org/10.6084/m9.figshare.23993331.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_5_of_Seasonal_patterns_in_microbial_carbon_and_iron_transporter_expression_in_the_Southern_Ocean/23993331/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.23993331 https://dx.doi.org/10.3354/ame030019 https://dx.doi.org/10.1016/b978-0-12-405940-5.00003-0 https://dx.doi.org/10.5670/oceanog.2009.109 https://dx.doi.org/10.1016/j.marchem.2012.10.004 https://dx.doi.org/10.1016/j.gca.2005.02.027 https://dx.doi.org/10.1080/713848382 https://dx.doi.org/10.3389/fmicb.2012.00069 https://dx.doi.org/10.1016/j.marchem.2014.01.012 https://dx.doi.org/10.1016/j.gca.2013.11.009 https://dx.doi.org/10.1002/2014gl062663 https://dx.doi.org/10.1073/pnas.1708779115 https://dx.doi.org/10.1038/s41396-021-00928-8 https://dx.doi.org/10.1126/sciadv.aaz4354 https://dx.doi.org/10.1038/ismej.2012.96 https://dx.doi.org/10.1073/pnas.1010732107 https://dx.doi.org/10.1073/pnas.1413137112 https://dx.doi.org/10.1111/j.1462-2920.2011.02539.x https://dx.doi.org/10.1128/aem.03128-15 https://dx.doi.org/10.1111/1462-2920.14621 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences ScholarlyArticle article-journal Journal contribution Text 2023 ftdatacite https://doi.org/10.6084/m9.figshare.23993331.v110.6084/m9.figshare.2399333110.3354/ame03001910.1016/b978-0-12-405940-5.00003-010.5670/oceanog.2009.10910.1016/j.marchem.2012.10.00410.1016/j.gca.2005.02.02710.1080/71384838210.3389/fmicb.2012.0006910.1016/j. 2023-09-04T14:25:54Z Additional file 5: Supplementary Figure 5. Heatmap of shared KEGG transporter proteins. All metatranscriptomes are shown in triplicates. Zscaling of normalized transcript counts by rows and Euclidian clustering by row and column. The presence of proteins in metaproteomes is defined by their presence in one duplicate. Transporter types are indicated by different colors: ABC – ATP-binding cassette transporter complex, AMT/NPP – Ammonium Channel Transporter/Nitrate, Nitrate Porter, CUT – Carbohydrate Uptake Transporter, OMP – Outer Membrane Protein, OMR – Outer Membrane Receptor, SSS – Solute Sodium Symporter, TRAP-T - Tripartite ATP-independent periplasmic transporters, TTT – Tripartite Tricarboxylate Transporter. ... Text Southern Ocean DataCite Metadata Store (German National Library of Science and Technology) Southern Ocean |
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DataCite Metadata Store (German National Library of Science and Technology) |
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language |
unknown |
topic |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences |
spellingShingle |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences Debeljak, Pavla Bayer, Barbara Sun, Ying Herndl, Gerhard J. Obernosterer, Ingrid Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
topic_facet |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences |
description |
Additional file 5: Supplementary Figure 5. Heatmap of shared KEGG transporter proteins. All metatranscriptomes are shown in triplicates. Zscaling of normalized transcript counts by rows and Euclidian clustering by row and column. The presence of proteins in metaproteomes is defined by their presence in one duplicate. Transporter types are indicated by different colors: ABC – ATP-binding cassette transporter complex, AMT/NPP – Ammonium Channel Transporter/Nitrate, Nitrate Porter, CUT – Carbohydrate Uptake Transporter, OMP – Outer Membrane Protein, OMR – Outer Membrane Receptor, SSS – Solute Sodium Symporter, TRAP-T - Tripartite ATP-independent periplasmic transporters, TTT – Tripartite Tricarboxylate Transporter. ... |
format |
Text |
author |
Debeljak, Pavla Bayer, Barbara Sun, Ying Herndl, Gerhard J. Obernosterer, Ingrid |
author_facet |
Debeljak, Pavla Bayer, Barbara Sun, Ying Herndl, Gerhard J. Obernosterer, Ingrid |
author_sort |
Debeljak, Pavla |
title |
Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
title_short |
Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
title_full |
Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
title_fullStr |
Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
title_full_unstemmed |
Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ... |
title_sort |
additional file 5 of seasonal patterns in microbial carbon and iron transporter expression in the southern ocean ... |
publisher |
figshare |
publishDate |
2023 |
url |
https://dx.doi.org/10.6084/m9.figshare.23993331.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_5_of_Seasonal_patterns_in_microbial_carbon_and_iron_transporter_expression_in_the_Southern_Ocean/23993331/1 |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Southern Ocean |
genre_facet |
Southern Ocean |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.23993331 https://dx.doi.org/10.3354/ame030019 https://dx.doi.org/10.1016/b978-0-12-405940-5.00003-0 https://dx.doi.org/10.5670/oceanog.2009.109 https://dx.doi.org/10.1016/j.marchem.2012.10.004 https://dx.doi.org/10.1016/j.gca.2005.02.027 https://dx.doi.org/10.1080/713848382 https://dx.doi.org/10.3389/fmicb.2012.00069 https://dx.doi.org/10.1016/j.marchem.2014.01.012 https://dx.doi.org/10.1016/j.gca.2013.11.009 https://dx.doi.org/10.1002/2014gl062663 https://dx.doi.org/10.1073/pnas.1708779115 https://dx.doi.org/10.1038/s41396-021-00928-8 https://dx.doi.org/10.1126/sciadv.aaz4354 https://dx.doi.org/10.1038/ismej.2012.96 https://dx.doi.org/10.1073/pnas.1010732107 https://dx.doi.org/10.1073/pnas.1413137112 https://dx.doi.org/10.1111/j.1462-2920.2011.02539.x https://dx.doi.org/10.1128/aem.03128-15 https://dx.doi.org/10.1111/1462-2920.14621 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.6084/m9.figshare.23993331.v110.6084/m9.figshare.2399333110.3354/ame03001910.1016/b978-0-12-405940-5.00003-010.5670/oceanog.2009.10910.1016/j.marchem.2012.10.00410.1016/j.gca.2005.02.02710.1080/71384838210.3389/fmicb.2012.0006910.1016/j. |
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