Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ...
Alignment files Alignments used to investigate the presence of intragenomic polymorphism in foraminiferal specimens. The .fasta files are organised in folders by helix and in single files by specimen_id. Phylogenetic trees Non-Spinose, Spinose and Microperforate .tree files used for the phylogenetic...
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Online Access: | https://dx.doi.org/10.6084/m9.figshare.21316374 https://figshare.com/articles/dataset/Supporting_data_to_Macroevolutionary_patterns_in_intragenomic_rDNA_variability_among_planktonic_foraminifera_/21316374 |
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ftdatacite:10.6084/m9.figshare.21316374 2023-06-11T04:16:07+02:00 Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... Greco, Mattia 2023 https://dx.doi.org/10.6084/m9.figshare.21316374 https://figshare.com/articles/dataset/Supporting_data_to_Macroevolutionary_patterns_in_intragenomic_rDNA_variability_among_planktonic_foraminifera_/21316374 unknown figshare Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Genetics not elsewhere classified Marine and estuarine ecology incl. marine ichthyology Microbial genetics Microbiology not elsewhere classified Plant cell and molecular biology Animal cell and molecular biology Dataset dataset 2023 ftdatacite https://doi.org/10.6084/m9.figshare.21316374 2023-05-02T09:35:56Z Alignment files Alignments used to investigate the presence of intragenomic polymorphism in foraminiferal specimens. The .fasta files are organised in folders by helix and in single files by specimen_id. Phylogenetic trees Non-Spinose, Spinose and Microperforate .tree files used for the phylogenetic analyses. cloning_effort.csv Table reporting the cloning effort for each species analysed in the study. The number of specimens cloned is reported in the column 'cloned' and the ones for which the sequence was obtained by direct sequencing in the column 'd_sequencing'. ig_incidence_by_region.csv Summary of the results of the analyses used to calculate intragenomic variability incidence for each region investigated. In the table we report the number of specimens with intragenomic variability, the total number of specimens analysed, the clade and the calculated incidence. overall_ig_incidence.csv Table reporting overall incidence of intragenomic variability including data from all the variable regions analysed for ... Dataset Planktonic foraminifera DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Genetics not elsewhere classified Marine and estuarine ecology incl. marine ichthyology Microbial genetics Microbiology not elsewhere classified Plant cell and molecular biology Animal cell and molecular biology |
spellingShingle |
Genetics not elsewhere classified Marine and estuarine ecology incl. marine ichthyology Microbial genetics Microbiology not elsewhere classified Plant cell and molecular biology Animal cell and molecular biology Greco, Mattia Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
topic_facet |
Genetics not elsewhere classified Marine and estuarine ecology incl. marine ichthyology Microbial genetics Microbiology not elsewhere classified Plant cell and molecular biology Animal cell and molecular biology |
description |
Alignment files Alignments used to investigate the presence of intragenomic polymorphism in foraminiferal specimens. The .fasta files are organised in folders by helix and in single files by specimen_id. Phylogenetic trees Non-Spinose, Spinose and Microperforate .tree files used for the phylogenetic analyses. cloning_effort.csv Table reporting the cloning effort for each species analysed in the study. The number of specimens cloned is reported in the column 'cloned' and the ones for which the sequence was obtained by direct sequencing in the column 'd_sequencing'. ig_incidence_by_region.csv Summary of the results of the analyses used to calculate intragenomic variability incidence for each region investigated. In the table we report the number of specimens with intragenomic variability, the total number of specimens analysed, the clade and the calculated incidence. overall_ig_incidence.csv Table reporting overall incidence of intragenomic variability including data from all the variable regions analysed for ... |
format |
Dataset |
author |
Greco, Mattia |
author_facet |
Greco, Mattia |
author_sort |
Greco, Mattia |
title |
Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
title_short |
Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
title_full |
Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
title_fullStr |
Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
title_full_unstemmed |
Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ... |
title_sort |
supporting data to 'macroevolutionary patterns in intragenomic rdna variability among planktonic foraminifera' ... |
publisher |
figshare |
publishDate |
2023 |
url |
https://dx.doi.org/10.6084/m9.figshare.21316374 https://figshare.com/articles/dataset/Supporting_data_to_Macroevolutionary_patterns_in_intragenomic_rDNA_variability_among_planktonic_foraminifera_/21316374 |
genre |
Planktonic foraminifera |
genre_facet |
Planktonic foraminifera |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.6084/m9.figshare.21316374 |
_version_ |
1768373555592953856 |