Supporting data to 'Macroevolutionary patterns in intragenomic rDNA variability among planktonic foraminifera' ...

• Main Author: Greco, Mattia
• Format: Dataset
• Language: unknown
• Published: figshare 2023
• Subjects: Genetics not elsewhere classified; Marine and estuarine ecology incl. marine ichthyology; Microbial genetics; Microbiology not elsewhere classified; Plant cell and molecular biology; Animal cell and molecular biology; Planktonic foraminifera
• Online Access: https://dx.doi.org/10.6084/m9.figshare.21316374.v1; https://figshare.com/articles/dataset/Supporting_data_to_Macroevolutionary_patterns_in_intragenomic_rDNA_variability_among_planktonic_foraminifera_/21316374/1

Alignment files Alignments used to investigate the presence of intragenomic polymorphism in foraminiferal specimens. The .fasta files are organised in folders by helix and in single files by specimen_id. Phylogenetic trees Non-Spinose, Spinose and Microperforate .tree files used for the phylogenetic analyses. cloning_effort.csv Table reporting the cloning effort for each species analysed in the study. The number of specimens cloned is reported in the column 'cloned' and the ones for which the sequence was obtained by direct sequencing in the column 'd_sequencing'. ig_incidence_by_region.csv Summary of the results of the analyses used to calculate intragenomic variability incidence for each region investigated. In the table we report the number of specimens with intragenomic variability, the total number of specimens analysed, the clade and the calculated incidence. overall_ig_incidence.csv Table reporting overall incidence of intragenomic variability including data from all the variable regions analysed for ...