Figure 2 | Phylogenetic Tree based on Toll-like Receptor 5 (TLR5) CDS

• Main Authors: Lofts, Brandon, Ramirez, Elizabeth, Tang, Xiaolu, vasquez, delbert
• Format: Still Image
• Language: unknown
• Published: figshare 2022
• Subjects: 60102 Bioinformatics; FOS Computer and information sciences; Delphinapterus leucas; Salmo salar
• Online Access: https://dx.doi.org/10.6084/m9.figshare.19330490.v1; https://figshare.com/articles/figure/Figure_2_Phylogenetic_Tree_based_on_Toll-like_Receptor_5_TLR5_CDS/19330490/1

Figure 2 | Phylogenetic Tree based on Toll-like Receptor 5 (TLR5) CDS Phylogenetic tree analysis based on CDS of TLR5, soluble TLR5 (sTLR5), and potentially soluble TLR5 ((s)TLR5) found in the following species: Salmo salar, Salmo trutta, Oncorhynchus tshawytscha, Oncorhynchus kisutch, Hucho hucho, Homo sapiens , Esox lucius, Oncorhynchus mykiss, Delphinapterus leucas . Aligned protein translation CDS sequences (See Complete Aligned multi-FASTA of Toll-like Receptor 5 (TLR5) CDS) were created using MUSCLE in Aliview. The genes boxed in yellow are (s)TLR5 that were identified from a BLASTN analysis (See BLASTN Analysis Results Files). The genes boxed in purple are known sTLR5 genes (Stephen et al.). The tree was made on Simple Phylogenetic Tree using a default tree format, the distance correction off, excluding gaps off, the clustering method as neighbor-joining, and P.I.M. off.