Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands
Title: Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islandsJournal: Ecology LettersAuthors: Xingfeng Si, Marc W. Cadotte, T. Jonathan Davies, Alexandre Antonelli, Ping Ding,...
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figshare
2022
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Online Access: | https://dx.doi.org/10.6084/m9.figshare.19193393.v1 https://figshare.com/articles/dataset/Phylogenetic_and_functional_clustering_illustrate_the_roles_of_adaptive_radiation_and_dispersal_filtering_in_jointly_shaping_late-Quaternary_mammal_assemblages_on_oceanic_islands/19193393/1 |
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ftdatacite:10.6084/m9.figshare.19193393.v1 |
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openpolar |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
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ftdatacite |
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unknown |
topic |
Ecology FOS Biological sciences 60302 Biogeography and Phylogeography 50202 Conservation and Biodiversity Zoology |
spellingShingle |
Ecology FOS Biological sciences 60302 Biogeography and Phylogeography 50202 Conservation and Biodiversity Zoology Si, Xingfeng Cadotte, Marc Jonathan Davies, T. Antonelli, Alexandre Ding, Ping Svenning, Jens-Christian Faurby, Søren Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
topic_facet |
Ecology FOS Biological sciences 60302 Biogeography and Phylogeography 50202 Conservation and Biodiversity Zoology |
description |
Title: Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islandsJournal: Ecology LettersAuthors: Xingfeng Si, Marc W. Cadotte, T. Jonathan Davies, Alexandre Antonelli, Ping Ding, Jens-Christian Svenning, Søren Faurby Data description Island variables were obtained from Weigelt et al. (2013) and UNEP (http://islands.unep.ch), mammal occurrence data and phylogeny from the PHYLACINE 1.2 database (Faurby et al. 2018), and mammal trait data from Faurby et al. (2018), Wilman et al. (2014), and Healy et al. (2014). island.csv - Island.ID: island IDs - Latitude: the latitude of the island - Longitude: the longitude of the island - Name: the name of the island - Geology: oceanic or continental. Oceanic islands were defined as volcanic islands that emerged from the oceanic floor or continental islands that occur in the world’s oceans, and which were not connected to larger islands or nearby continental landmasses during the Last Glacial Maximum (LGM). Continental islands were defined as continental plate fragments which have been isolated during the LGM. In this study, all continental fragments (e.g., New Guinea, Borneo, Great Britain, and Hainan Island) and volcanic islands (e.g., Honshu and Kyushu Islands of Japan, Kefallinia and Ikaria Islands of Greece) that were attached to larger islands or continental landmasses during the LGM were excluded. - Area: Island area (km 2 ) was measured as the polygon area of landmass surrounded by ocean using a cylindrical equal-area projection (Weigelt et al. 2013) - Isolation: Isolation (km) was calculated as the distance from an island’s mass centroid to the nearest mainland coast (excluding Antarctica which is covered by ice permanently) (Weigelt et al. 2013) - Temperature: maximum values per island polygon of mean annual temperature (°C). Specifically, temperature was transformed as: –1 × log 10 (max(x) + 1 – x), where max(x) is the maximum value of temperature (in °C) for included islands, to avoid non-positive values in log 10 -transformation. - Precipitation: maximum values per island polygon of mean annual precipitation (mm). Precipitation was rescaled as x/1000, where x is the original value of precipitation in millimetres mammal.occurrence.csv - Island.ID: island IDs mammal.phylo.txt - obtain from PHYLACINE 1.2 database mammal.trait.csv - Latin.name: Latin names of mammal species - Mass: body mass (grams, log 10 -transformed) - Diet.Plant, Diet.Vertebrate, Diet.Invertebrate: the percentage of three categories (i.e., vertebrate prey, invertebrate prey, and plants) - ForStrat.Value: Foraging stratum was coded as aerial, arboreal, ground level, or fossorial. - Activity: The timing of daily foraging activity was coded as diurnal, nocturnal, crepuscular (active at dusk and dawn), or cathemeral (active at any time of day) |
format |
Dataset |
author |
Si, Xingfeng Cadotte, Marc Jonathan Davies, T. Antonelli, Alexandre Ding, Ping Svenning, Jens-Christian Faurby, Søren |
author_facet |
Si, Xingfeng Cadotte, Marc Jonathan Davies, T. Antonelli, Alexandre Ding, Ping Svenning, Jens-Christian Faurby, Søren |
author_sort |
Si, Xingfeng |
title |
Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
title_short |
Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
title_full |
Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
title_fullStr |
Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
title_full_unstemmed |
Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands |
title_sort |
phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-quaternary mammal assemblages on oceanic islands |
publisher |
figshare |
publishDate |
2022 |
url |
https://dx.doi.org/10.6084/m9.figshare.19193393.v1 https://figshare.com/articles/dataset/Phylogenetic_and_functional_clustering_illustrate_the_roles_of_adaptive_radiation_and_dispersal_filtering_in_jointly_shaping_late-Quaternary_mammal_assemblages_on_oceanic_islands/19193393/1 |
long_lat |
ENVELOPE(-61.650,-61.650,-63.717,-63.717) ENVELOPE(15.446,15.446,67.286,67.286) |
geographic |
Antonelli Svenning |
geographic_facet |
Antonelli Svenning |
genre |
Antarc* Antarctica |
genre_facet |
Antarc* Antarctica |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.19193393 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.19193393.v1 https://doi.org/10.6084/m9.figshare.19193393 |
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1766151587395272704 |
spelling |
ftdatacite:10.6084/m9.figshare.19193393.v1 2023-05-15T13:41:30+02:00 Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islands Si, Xingfeng Cadotte, Marc Jonathan Davies, T. Antonelli, Alexandre Ding, Ping Svenning, Jens-Christian Faurby, Søren 2022 https://dx.doi.org/10.6084/m9.figshare.19193393.v1 https://figshare.com/articles/dataset/Phylogenetic_and_functional_clustering_illustrate_the_roles_of_adaptive_radiation_and_dispersal_filtering_in_jointly_shaping_late-Quaternary_mammal_assemblages_on_oceanic_islands/19193393/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.19193393 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Ecology FOS Biological sciences 60302 Biogeography and Phylogeography 50202 Conservation and Biodiversity Zoology Dataset dataset 2022 ftdatacite https://doi.org/10.6084/m9.figshare.19193393.v1 https://doi.org/10.6084/m9.figshare.19193393 2022-04-01T16:18:40Z Title: Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late-Quaternary mammal assemblages on oceanic islandsJournal: Ecology LettersAuthors: Xingfeng Si, Marc W. Cadotte, T. Jonathan Davies, Alexandre Antonelli, Ping Ding, Jens-Christian Svenning, Søren Faurby Data description Island variables were obtained from Weigelt et al. (2013) and UNEP (http://islands.unep.ch), mammal occurrence data and phylogeny from the PHYLACINE 1.2 database (Faurby et al. 2018), and mammal trait data from Faurby et al. (2018), Wilman et al. (2014), and Healy et al. (2014). island.csv - Island.ID: island IDs - Latitude: the latitude of the island - Longitude: the longitude of the island - Name: the name of the island - Geology: oceanic or continental. Oceanic islands were defined as volcanic islands that emerged from the oceanic floor or continental islands that occur in the world’s oceans, and which were not connected to larger islands or nearby continental landmasses during the Last Glacial Maximum (LGM). Continental islands were defined as continental plate fragments which have been isolated during the LGM. In this study, all continental fragments (e.g., New Guinea, Borneo, Great Britain, and Hainan Island) and volcanic islands (e.g., Honshu and Kyushu Islands of Japan, Kefallinia and Ikaria Islands of Greece) that were attached to larger islands or continental landmasses during the LGM were excluded. - Area: Island area (km 2 ) was measured as the polygon area of landmass surrounded by ocean using a cylindrical equal-area projection (Weigelt et al. 2013) - Isolation: Isolation (km) was calculated as the distance from an island’s mass centroid to the nearest mainland coast (excluding Antarctica which is covered by ice permanently) (Weigelt et al. 2013) - Temperature: maximum values per island polygon of mean annual temperature (°C). Specifically, temperature was transformed as: –1 × log 10 (max(x) + 1 – x), where max(x) is the maximum value of temperature (in °C) for included islands, to avoid non-positive values in log 10 -transformation. - Precipitation: maximum values per island polygon of mean annual precipitation (mm). Precipitation was rescaled as x/1000, where x is the original value of precipitation in millimetres mammal.occurrence.csv - Island.ID: island IDs mammal.phylo.txt - obtain from PHYLACINE 1.2 database mammal.trait.csv - Latin.name: Latin names of mammal species - Mass: body mass (grams, log 10 -transformed) - Diet.Plant, Diet.Vertebrate, Diet.Invertebrate: the percentage of three categories (i.e., vertebrate prey, invertebrate prey, and plants) - ForStrat.Value: Foraging stratum was coded as aerial, arboreal, ground level, or fossorial. - Activity: The timing of daily foraging activity was coded as diurnal, nocturnal, crepuscular (active at dusk and dawn), or cathemeral (active at any time of day) Dataset Antarc* Antarctica DataCite Metadata Store (German National Library of Science and Technology) Antonelli ENVELOPE(-61.650,-61.650,-63.717,-63.717) Svenning ENVELOPE(15.446,15.446,67.286,67.286) |