IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020

This datapack contains anvi'o contigs databases for 16 metagenome samples from the Cao et al 2020 paper (https://doi.org/10.1186/s40168-020-00826-9) that were assembled using IDBA-UD as part of the anvi'o metagenomic workflow. It also contains a tab-delimited metadata file derived from dat...

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Bibliographic Details
Main Author: Veseli, Iva
Format: Dataset
Language:unknown
Published: figshare 2021
Subjects:
60408 Genomics
FOS Biological sciences
Marine Biology
Arctic
Arctic Ocean
Online Access:https://dx.doi.org/10.6084/m9.figshare.16807150
https://figshare.com/articles/dataset/IDBA-UD_Assemblies_of_16_Arctic_Ocean_Metagenomes_from_Cao_et_al_2020/16807150
id ftdatacite:10.6084/m9.figshare.16807150
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.16807150 2023-05-15T15:01:13+02:00 IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020 Veseli, Iva 2021 https://dx.doi.org/10.6084/m9.figshare.16807150 https://figshare.com/articles/dataset/IDBA-UD_Assemblies_of_16_Arctic_Ocean_Metagenomes_from_Cao_et_al_2020/16807150 unknown figshare Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY 60408 Genomics FOS Biological sciences Marine Biology dataset Dataset 2021 ftdatacite https://doi.org/10.6084/m9.figshare.16807150 2021-11-05T12:55:41Z This datapack contains anvi'o contigs databases for 16 metagenome samples from the Cao et al 2020 paper (https://doi.org/10.1186/s40168-020-00826-9) that were assembled using IDBA-UD as part of the anvi'o metagenomic workflow. It also contains a tab-delimited metadata file derived from data provided in the Cao et al paper, describing the depth, sampling location, and public database accession numbers of each Cao et al sample (including the 16 assemblies within this datapack). The database names do not correspond to the original sample names from the Cao et al paper. You can find the original sample names in the metadata file. The size of the unzipped datapack is 6.5 GB. Dataset Arctic Arctic Ocean DataCite Metadata Store (German National Library of Science and Technology) Arctic Arctic Ocean
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic 60408 Genomics
FOS Biological sciences
Marine Biology
spellingShingle 60408 Genomics
FOS Biological sciences
Marine Biology
Veseli, Iva
IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
topic_facet 60408 Genomics
FOS Biological sciences
Marine Biology
description This datapack contains anvi'o contigs databases for 16 metagenome samples from the Cao et al 2020 paper (https://doi.org/10.1186/s40168-020-00826-9) that were assembled using IDBA-UD as part of the anvi'o metagenomic workflow. It also contains a tab-delimited metadata file derived from data provided in the Cao et al paper, describing the depth, sampling location, and public database accession numbers of each Cao et al sample (including the 16 assemblies within this datapack). The database names do not correspond to the original sample names from the Cao et al paper. You can find the original sample names in the metadata file. The size of the unzipped datapack is 6.5 GB.
format Dataset
author Veseli, Iva
author_facet Veseli, Iva
author_sort Veseli, Iva
title IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
title_short IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
title_full IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
title_fullStr IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
title_full_unstemmed IDBA-UD Assemblies of 16 Arctic Ocean Metagenomes from Cao et al 2020
title_sort idba-ud assemblies of 16 arctic ocean metagenomes from cao et al 2020
publisher figshare
publishDate 2021
url https://dx.doi.org/10.6084/m9.figshare.16807150
https://figshare.com/articles/dataset/IDBA-UD_Assemblies_of_16_Arctic_Ocean_Metagenomes_from_Cao_et_al_2020/16807150
geographic Arctic
Arctic Ocean
geographic_facet Arctic
Arctic Ocean
genre Arctic
Arctic Ocean
genre_facet Arctic
Arctic Ocean
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.16807150
_version_ 1766333246629478400

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