Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities
Additional file 12: Figure S6. Stability within SalmoSim system calculated by using different UniFrac values for pairwise beta diversity analysis. The figure represents microbial stability within the SalmoSim system (data from all gut compartments and two different technical replicate runs combined)...
Main Authors: | , , , , , , , , , , , , |
---|---|
Format: | Text |
Language: | unknown |
Published: |
figshare
2021
|
Subjects: | |
Online Access: | https://dx.doi.org/10.6084/m9.figshare.16551210.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_13_of_SalmoSim_the_development_of_a_three-compartment_in_vitro_simulator_of_the_Atlantic_salmon_GI_tract_and_associated_microbial_communities/16551210/1 |
id |
ftdatacite:10.6084/m9.figshare.16551210.v1 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.6084/m9.figshare.16551210.v1 2023-05-15T15:32:07+02:00 Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities Kazlauskaite, Raminta Cheaib, Bachar Heys, Chloe Ijaz, Umer Zeeshan Connelly, Stephanie Sloan, William Russel, Julie Rubio, Laura Sweetman, John Kitts, Alex McGinnity, Philip Lyons, Philip Llewellyn, Martin 2021 https://dx.doi.org/10.6084/m9.figshare.16551210.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_13_of_SalmoSim_the_development_of_a_three-compartment_in_vitro_simulator_of_the_Atlantic_salmon_GI_tract_and_associated_microbial_communities/16551210/1 unknown figshare https://dx.doi.org/10.1186/s40168-021-01134-6 https://dx.doi.org/10.6084/m9.figshare.16551210 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Genetics Text article-journal Journal contribution ScholarlyArticle 2021 ftdatacite https://doi.org/10.6084/m9.figshare.16551210.v1 https://doi.org/10.1186/s40168-021-01134-6 https://doi.org/10.6084/m9.figshare.16551210 2021-11-05T12:55:41Z Additional file 12: Figure S6. Stability within SalmoSim system calculated by using different UniFrac values for pairwise beta diversity analysis. The figure represents microbial stability within the SalmoSim system (data from all gut compartments and two different technical replicate runs combined) as the pairwise beta diversity comparison between different sampling time points (days), calculated by using unweighted (0%), generalised (50%) and weighted (100%) UniFrac as a distance measure. A small p-value indicates that the two time points are statistically different, and p>0.05 indicates that two time points are not statistically different. The colour key illustrates the p-value: red end of spectrum denoting low p values (distinct compositions between time points) and dark green indicating high p values (similar compositions between timepoints). Text Atlantic salmon DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Microbiology FOS Biological sciences Genetics |
spellingShingle |
Microbiology FOS Biological sciences Genetics Kazlauskaite, Raminta Cheaib, Bachar Heys, Chloe Ijaz, Umer Zeeshan Connelly, Stephanie Sloan, William Russel, Julie Rubio, Laura Sweetman, John Kitts, Alex McGinnity, Philip Lyons, Philip Llewellyn, Martin Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
topic_facet |
Microbiology FOS Biological sciences Genetics |
description |
Additional file 12: Figure S6. Stability within SalmoSim system calculated by using different UniFrac values for pairwise beta diversity analysis. The figure represents microbial stability within the SalmoSim system (data from all gut compartments and two different technical replicate runs combined) as the pairwise beta diversity comparison between different sampling time points (days), calculated by using unweighted (0%), generalised (50%) and weighted (100%) UniFrac as a distance measure. A small p-value indicates that the two time points are statistically different, and p>0.05 indicates that two time points are not statistically different. The colour key illustrates the p-value: red end of spectrum denoting low p values (distinct compositions between time points) and dark green indicating high p values (similar compositions between timepoints). |
format |
Text |
author |
Kazlauskaite, Raminta Cheaib, Bachar Heys, Chloe Ijaz, Umer Zeeshan Connelly, Stephanie Sloan, William Russel, Julie Rubio, Laura Sweetman, John Kitts, Alex McGinnity, Philip Lyons, Philip Llewellyn, Martin |
author_facet |
Kazlauskaite, Raminta Cheaib, Bachar Heys, Chloe Ijaz, Umer Zeeshan Connelly, Stephanie Sloan, William Russel, Julie Rubio, Laura Sweetman, John Kitts, Alex McGinnity, Philip Lyons, Philip Llewellyn, Martin |
author_sort |
Kazlauskaite, Raminta |
title |
Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
title_short |
Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
title_full |
Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
title_fullStr |
Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
title_full_unstemmed |
Additional file 13 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities |
title_sort |
additional file 13 of salmosim: the development of a three-compartment in vitro simulator of the atlantic salmon gi tract and associated microbial communities |
publisher |
figshare |
publishDate |
2021 |
url |
https://dx.doi.org/10.6084/m9.figshare.16551210.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_13_of_SalmoSim_the_development_of_a_three-compartment_in_vitro_simulator_of_the_Atlantic_salmon_GI_tract_and_associated_microbial_communities/16551210/1 |
genre |
Atlantic salmon |
genre_facet |
Atlantic salmon |
op_relation |
https://dx.doi.org/10.1186/s40168-021-01134-6 https://dx.doi.org/10.6084/m9.figshare.16551210 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.16551210.v1 https://doi.org/10.1186/s40168-021-01134-6 https://doi.org/10.6084/m9.figshare.16551210 |
_version_ |
1766362628228120576 |