variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz

Nucleotide variants used in a publication (Title: The pink salmon genome: Uncovering the genomic consequences of a strict two-year life-cyclep { margin-bottom: 0.25cm; line-height: 115%; background: transparent }a:link { color: #000080; so-language: zxx; text-decoration: underline }). Please refer t...

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Bibliographic Details
Main Author: Christensen, Kris
Format: Dataset
Language:unknown
Published: figshare 2021
Subjects:
60408 Genomics
FOS Biological sciences
Genetics
Marine Biology
Pink salmon
Online Access:https://dx.doi.org/10.6084/m9.figshare.14963739.v1
https://figshare.com/articles/dataset/variants_GATK_iteration_1_Full_sorted_vcftools_biAllelicSNP_maf05_mm0_9_recode_vcf_gz/14963739/1
id ftdatacite:10.6084/m9.figshare.14963739.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.14963739.v1 2023-05-15T17:59:38+02:00 variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz Christensen, Kris 2021 https://dx.doi.org/10.6084/m9.figshare.14963739.v1 https://figshare.com/articles/dataset/variants_GATK_iteration_1_Full_sorted_vcftools_biAllelicSNP_maf05_mm0_9_recode_vcf_gz/14963739/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.14963739 MIT License https://opensource.org/licenses/MIT mit MIT 60408 Genomics FOS Biological sciences Genetics Marine Biology dataset Dataset 2021 ftdatacite https://doi.org/10.6084/m9.figshare.14963739.v1 https://doi.org/10.6084/m9.figshare.14963739 2021-11-05T12:55:41Z Nucleotide variants used in a publication (Title: The pink salmon genome: Uncovering the genomic consequences of a strict two-year life-cyclep { margin-bottom: 0.25cm; line-height: 115%; background: transparent }a:link { color: #000080; so-language: zxx; text-decoration: underline }). Please refer to this publication for the methods and sampling locations. These variants were identified from whole-genome resequencing data from 61 individuals using GATK. The genome the resequencing data was identified from is available in this repository (10.6084/m9.figshare.14963721). These variants were also mapped to various genomes using the following scripts: https://github.com/KrisChristensen/MapVCF2NewGenome Dataset Pink salmon DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic 60408 Genomics
FOS Biological sciences
Genetics
Marine Biology
spellingShingle 60408 Genomics
FOS Biological sciences
Genetics
Marine Biology
Christensen, Kris
variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
topic_facet 60408 Genomics
FOS Biological sciences
Genetics
Marine Biology
description Nucleotide variants used in a publication (Title: The pink salmon genome: Uncovering the genomic consequences of a strict two-year life-cyclep { margin-bottom: 0.25cm; line-height: 115%; background: transparent }a:link { color: #000080; so-language: zxx; text-decoration: underline }). Please refer to this publication for the methods and sampling locations. These variants were identified from whole-genome resequencing data from 61 individuals using GATK. The genome the resequencing data was identified from is available in this repository (10.6084/m9.figshare.14963721). These variants were also mapped to various genomes using the following scripts: https://github.com/KrisChristensen/MapVCF2NewGenome
format Dataset
author Christensen, Kris
author_facet Christensen, Kris
author_sort Christensen, Kris
title variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
title_short variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
title_full variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
title_fullStr variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
title_full_unstemmed variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz
title_sort variants.gatk.iteration.1.full.sorted.vcftools.biallelicsnp.maf05.mm0.9.recode.vcf.gz
publisher figshare
publishDate 2021
url https://dx.doi.org/10.6084/m9.figshare.14963739.v1
https://figshare.com/articles/dataset/variants_GATK_iteration_1_Full_sorted_vcftools_biAllelicSNP_maf05_mm0_9_recode_vcf_gz/14963739/1
genre Pink salmon
genre_facet Pink salmon
op_relation https://dx.doi.org/10.6084/m9.figshare.14963739
op_rights MIT License
https://opensource.org/licenses/MIT
mit
op_rightsnorm MIT
op_doi https://doi.org/10.6084/m9.figshare.14963739.v1
https://doi.org/10.6084/m9.figshare.14963739
_version_ 1766168476003598336

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