Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.

The genus Lavandula L. consists of 39 species distributed from the North Atlantic Islands, across the Mediterranean Basin to India. We analysed 36 taxa of the genus Lavandula representing two of the three subgenera and six of the eight sections according to the most recent classification (Upson &...

Full description

Bibliographic Details
Main Authors: S. Moja, Y. Guitton, F. Nicolè, L. Legendre, B. Pasquier, T. Upson, F. Jullien
Format: Dataset
Language:unknown
Published: Taylor & Francis 2015
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.1305733.v2
https://tandf.figshare.com/articles/dataset/Genome_size_and_plastid_trnK_matK_markers_give_new_insights_into_the_evolutionary_history_of_the_genus_i_Lavandula_i_L_/1305733/2
id ftdatacite:10.6084/m9.figshare.1305733.v2
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.1305733.v2 2023-05-15T17:34:35+02:00 Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L. S. Moja Y. Guitton F. Nicolè L. Legendre B. Pasquier T. Upson F. Jullien 2015 https://dx.doi.org/10.6084/m9.figshare.1305733.v2 https://tandf.figshare.com/articles/dataset/Genome_size_and_plastid_trnK_matK_markers_give_new_insights_into_the_evolutionary_history_of_the_genus_i_Lavandula_i_L_/1305733/2 unknown Taylor & Francis https://dx.doi.org/10.1080/11263504.2015.1014006 https://dx.doi.org/10.6084/m9.figshare.1305733 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Genetics Evolutionary Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology 69999 Biological Sciences not elsewhere classified 110309 Infectious Diseases FOS Health sciences Plant Biology 60506 Virology dataset Dataset 2015 ftdatacite https://doi.org/10.6084/m9.figshare.1305733.v2 https://doi.org/10.1080/11263504.2015.1014006 https://doi.org/10.6084/m9.figshare.1305733 2021-11-05T12:55:41Z The genus Lavandula L. consists of 39 species distributed from the North Atlantic Islands, across the Mediterranean Basin to India. We analysed 36 taxa of the genus Lavandula representing two of the three subgenera and six of the eight sections according to the most recent classification (Upson & Andrews 2004). We achieved a phylogenetic reconstruction from partial sequences from plastid trnK and matK genes; the genome size was estimated by flow cytometer measurements. The primary aim was to track phylogenetic patterns through the maternal inherited marker at the sectional level and identify possible genome duplications. The cpDNA tree shows the phylogenetic relationships between subgenus, sections and also elucidates for the first time the relationships between the endemic species of Macaronesia, Morocco and Arabia. The ancestral split between the two subgenera could be explained by dispersal followed by an early vicariance event. The C -value shows genome up-sizing within several phylogenetic clades and geographical areas. An ancestral genome-up sizing is characterized at the node of section Dentatae and Lavandula . The cpDNA tree suggests that the taxa L. angustifolia subsp. pyrenaica (DC.) Guinea and L. stoechas subsp. luiseiri are best treated as a distinct species. Dataset North Atlantic DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
110309 Infectious Diseases
FOS Health sciences
Plant Biology
60506 Virology
spellingShingle Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
110309 Infectious Diseases
FOS Health sciences
Plant Biology
60506 Virology
S. Moja
Y. Guitton
F. Nicolè
L. Legendre
B. Pasquier
T. Upson
F. Jullien
Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
topic_facet Microbiology
FOS Biological sciences
Genetics
Evolutionary Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
69999 Biological Sciences not elsewhere classified
110309 Infectious Diseases
FOS Health sciences
Plant Biology
60506 Virology
description The genus Lavandula L. consists of 39 species distributed from the North Atlantic Islands, across the Mediterranean Basin to India. We analysed 36 taxa of the genus Lavandula representing two of the three subgenera and six of the eight sections according to the most recent classification (Upson & Andrews 2004). We achieved a phylogenetic reconstruction from partial sequences from plastid trnK and matK genes; the genome size was estimated by flow cytometer measurements. The primary aim was to track phylogenetic patterns through the maternal inherited marker at the sectional level and identify possible genome duplications. The cpDNA tree shows the phylogenetic relationships between subgenus, sections and also elucidates for the first time the relationships between the endemic species of Macaronesia, Morocco and Arabia. The ancestral split between the two subgenera could be explained by dispersal followed by an early vicariance event. The C -value shows genome up-sizing within several phylogenetic clades and geographical areas. An ancestral genome-up sizing is characterized at the node of section Dentatae and Lavandula . The cpDNA tree suggests that the taxa L. angustifolia subsp. pyrenaica (DC.) Guinea and L. stoechas subsp. luiseiri are best treated as a distinct species.
format Dataset
author S. Moja
Y. Guitton
F. Nicolè
L. Legendre
B. Pasquier
T. Upson
F. Jullien
author_facet S. Moja
Y. Guitton
F. Nicolè
L. Legendre
B. Pasquier
T. Upson
F. Jullien
author_sort S. Moja
title Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
title_short Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
title_full Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
title_fullStr Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
title_full_unstemmed Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus Lavandula L.
title_sort genome size and plastid trnk-matk markers give new insights into the evolutionary history of the genus lavandula l.
publisher Taylor & Francis
publishDate 2015
url https://dx.doi.org/10.6084/m9.figshare.1305733.v2
https://tandf.figshare.com/articles/dataset/Genome_size_and_plastid_trnK_matK_markers_give_new_insights_into_the_evolutionary_history_of_the_genus_i_Lavandula_i_L_/1305733/2
genre North Atlantic
genre_facet North Atlantic
op_relation https://dx.doi.org/10.1080/11263504.2015.1014006
https://dx.doi.org/10.6084/m9.figshare.1305733
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.1305733.v2
https://doi.org/10.1080/11263504.2015.1014006
https://doi.org/10.6084/m9.figshare.1305733
_version_ 1766133482835148800